Gene : Phvul.007G261000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF22 - PROTEIN TRICHOME BIREFRINGENCE-RELATED Genomic Order:  2467
Name:  ? Phvul.007G261000 Secondary Identifier:  ? PAC:37167658
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G261000 0.5kb upstream 0.5kb upstream 4248 true Chr07: 38259443-38263690 Phaseolus vulgaris
Phvul.007G261000 0.5kb upstream 0.5kb upstream 500 false Chr07: 38263191-38263690 Phaseolus vulgaris
Phvul.007G261000 0.5kb downstream 0.5kb downstream 4248 true Chr07: 38258943-38263190 Phaseolus vulgaris
Phvul.007G261000 0.5kb downstream 0.5kb downstream 500 false Chr07: 38258943-38259442 Phaseolus vulgaris
Phvul.007G261000 1.0kb upstream 1.0kb upstream 4748 true Chr07: 38259443-38264190 Phaseolus vulgaris
Phvul.007G261000 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38263191-38264190 Phaseolus vulgaris
Phvul.007G261000 1.0kb downstream 1.0kb downstream 4748 true Chr07: 38258443-38263190 Phaseolus vulgaris
Phvul.007G261000 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38258443-38259442 Phaseolus vulgaris
Phvul.007G261000 2.0kb upstream 2.0kb upstream 5748 true Chr07: 38259443-38265190 Phaseolus vulgaris
Phvul.007G261000 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38263191-38265190 Phaseolus vulgaris
Phvul.007G261000 2.0kb downstream 2.0kb downstream 5748 true Chr07: 38257443-38263190 Phaseolus vulgaris
Phvul.007G261000 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38257443-38259442 Phaseolus vulgaris
Phvul.007G261000 5.0kb upstream 5.0kb upstream 8748 true Chr07: 38259443-38268190 Phaseolus vulgaris
Phvul.007G261000 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38263191-38268190 Phaseolus vulgaris
Phvul.007G261000 5.0kb downstream 5.0kb downstream 8748 true Chr07: 38254443-38263190 Phaseolus vulgaris
Phvul.007G261000 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38254443-38259442 Phaseolus vulgaris
Phvul.007G261000 10.0kb upstream 10.0kb upstream 13748 true Chr07: 38259443-38273190 Phaseolus vulgaris
Phvul.007G261000 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38263191-38273190 Phaseolus vulgaris
Phvul.007G261000 10.0kb downstream 10.0kb downstream 13748 true Chr07: 38249443-38263190 Phaseolus vulgaris
Phvul.007G261000 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38249443-38259442 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303438 5265 Fabidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.98284 0.0 19.0173   High
cufflinks 3.27259 0.0 9.59889    
cufflinks 4.96053 0.0 13.8845    
cufflinks 5.16143 0.0 14.5323    
cufflinks 5.31212 0.0 14.9436    
cufflinks 3.92 0.0 11.256    
cufflinks 3.87737 0.0 11.1264    
cufflinks 2.88226 0.0 8.50524   Low
cufflinks 3.02192 0.0 8.92989   Low
cufflinks 8.77525 0.0 23.5228   High
cufflinks 5.43729 0.0 15.2348    

0 Strain