Gene : Phvul.005G119100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22849//PTHR22849:SF11 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1196
Name:  ? Phvul.005G119100 Secondary Identifier:  ? PAC:37152556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G119100 0.5kb upstream 0.5kb upstream 1985 true Chr05: 35435713-35437697 Phaseolus vulgaris
Phvul.005G119100 0.5kb upstream 0.5kb upstream 500 false Chr05: 35435713-35436212 Phaseolus vulgaris
Phvul.005G119100 0.5kb downstream 0.5kb downstream 1985 true Chr05: 35436213-35438197 Phaseolus vulgaris
Phvul.005G119100 0.5kb downstream 0.5kb downstream 500 false Chr05: 35437698-35438197 Phaseolus vulgaris
Phvul.005G119100 1.0kb upstream 1.0kb upstream 2485 true Chr05: 35435213-35437697 Phaseolus vulgaris
Phvul.005G119100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35435213-35436212 Phaseolus vulgaris
Phvul.005G119100 1.0kb downstream 1.0kb downstream 2485 true Chr05: 35436213-35438697 Phaseolus vulgaris
Phvul.005G119100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35437698-35438697 Phaseolus vulgaris
Phvul.005G119100 2.0kb upstream 2.0kb upstream 3485 true Chr05: 35434213-35437697 Phaseolus vulgaris
Phvul.005G119100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35434213-35436212 Phaseolus vulgaris
Phvul.005G119100 2.0kb downstream 2.0kb downstream 3485 true Chr05: 35436213-35439697 Phaseolus vulgaris
Phvul.005G119100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35437698-35439697 Phaseolus vulgaris
Phvul.005G119100 5.0kb upstream 5.0kb upstream 6485 true Chr05: 35431213-35437697 Phaseolus vulgaris
Phvul.005G119100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35431213-35436212 Phaseolus vulgaris
Phvul.005G119100 5.0kb downstream 5.0kb downstream 6485 true Chr05: 35436213-35442697 Phaseolus vulgaris
Phvul.005G119100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35437698-35442697 Phaseolus vulgaris
Phvul.005G119100 10.0kb upstream 10.0kb upstream 11485 true Chr05: 35426213-35437697 Phaseolus vulgaris
Phvul.005G119100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35426213-35436212 Phaseolus vulgaris
Phvul.005G119100 10.0kb downstream 10.0kb downstream 11485 true Chr05: 35436213-35447697 Phaseolus vulgaris
Phvul.005G119100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35437698-35447697 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303042 5265 Fabidae View MSA
124070455 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.176072 0.0 0.721128 Low  
cufflinks 0.163435 0.0 0.673187 Low  
cufflinks 0.301129 0.0 1.18094 Low  
cufflinks 0.046986 0.0 0.218257 Low Low
cufflinks 0.297645 0.0 1.1719 Low  
cufflinks 1.10296 0.0 3.8753   High
cufflinks 0.940372 0.0 3.3521    
cufflinks 0.185883 0.0 0.757542 Low  
cufflinks 3.5544 0.0 10.9431   High
cufflinks 0.316899 0.0 1.24046 Low  
cufflinks 0.329084 0.0 1.28471 Low  

0 Strain