Gene : Phvul.005G126900 P. vulgaris v2.1
Defline:  (1 of 2) PF04032 - RNAse P Rpr2/Rpp21/SNM1 subunit domain (Rpr2) Genomic Order:  1276
Name:  ? Phvul.005G126900 Secondary Identifier:  ? PAC:37152437
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G126900 0.5kb upstream 0.5kb upstream 2308 true Chr05: 36444932-36447239 Phaseolus vulgaris
Phvul.005G126900 0.5kb upstream 0.5kb upstream 500 false Chr05: 36444932-36445431 Phaseolus vulgaris
Phvul.005G126900 0.5kb downstream 0.5kb downstream 2308 true Chr05: 36445432-36447739 Phaseolus vulgaris
Phvul.005G126900 0.5kb downstream 0.5kb downstream 500 false Chr05: 36447240-36447739 Phaseolus vulgaris
Phvul.005G126900 1.0kb upstream 1.0kb upstream 2808 true Chr05: 36444432-36447239 Phaseolus vulgaris
Phvul.005G126900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 36444432-36445431 Phaseolus vulgaris
Phvul.005G126900 1.0kb downstream 1.0kb downstream 2808 true Chr05: 36445432-36448239 Phaseolus vulgaris
Phvul.005G126900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 36447240-36448239 Phaseolus vulgaris
Phvul.005G126900 2.0kb upstream 2.0kb upstream 3808 true Chr05: 36443432-36447239 Phaseolus vulgaris
Phvul.005G126900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 36443432-36445431 Phaseolus vulgaris
Phvul.005G126900 2.0kb downstream 2.0kb downstream 3808 true Chr05: 36445432-36449239 Phaseolus vulgaris
Phvul.005G126900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 36447240-36449239 Phaseolus vulgaris
Phvul.005G126900 5.0kb upstream 5.0kb upstream 6808 true Chr05: 36440432-36447239 Phaseolus vulgaris
Phvul.005G126900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 36440432-36445431 Phaseolus vulgaris
Phvul.005G126900 5.0kb downstream 5.0kb downstream 6808 true Chr05: 36445432-36452239 Phaseolus vulgaris
Phvul.005G126900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 36447240-36452239 Phaseolus vulgaris
Phvul.005G126900 10.0kb upstream 10.0kb upstream 11808 true Chr05: 36435432-36447239 Phaseolus vulgaris
Phvul.005G126900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 36435432-36445431 Phaseolus vulgaris
Phvul.005G126900 10.0kb downstream 10.0kb downstream 11808 true Chr05: 36445432-36457239 Phaseolus vulgaris
Phvul.005G126900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 36447240-36457239 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311743 5265 Fabidae View MSA
124068689 5270 Rosid View MSA
123752807 5271 Pentapetalae View MSA
122789291 5272 Eudicot View MSA
122046039 5273 Angiosperm View MSA
121350637 5274 Embryophyte View MSA
123381830 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.314832 0.0 1.28944 Low  
cufflinks 0.366684 0.0 1.48008 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.111243 0.0 0.499258 Low Low
cufflinks 0.470605 0.0 1.85811 Low  
cufflinks 1.07708 0.0 3.96664   High
cufflinks 0.610412 0.0 2.36226    
cufflinks 0.137327 0.0 0.604889 Low  
cufflinks 0.0904599 0.0 0.416766 Low Low

0 Strain