Gene : Phvul.007G267800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22849//PTHR22849:SF24 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2537
Name:  ? Phvul.007G267800 Secondary Identifier:  ? PAC:37164708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G267800 0.5kb upstream 0.5kb upstream 2557 true Chr07: 38893531-38896087 Phaseolus vulgaris
Phvul.007G267800 0.5kb upstream 0.5kb upstream 500 false Chr07: 38895588-38896087 Phaseolus vulgaris
Phvul.007G267800 0.5kb downstream 0.5kb downstream 2557 true Chr07: 38893031-38895587 Phaseolus vulgaris
Phvul.007G267800 0.5kb downstream 0.5kb downstream 500 false Chr07: 38893031-38893530 Phaseolus vulgaris
Phvul.007G267800 1.0kb upstream 1.0kb upstream 3057 true Chr07: 38893531-38896587 Phaseolus vulgaris
Phvul.007G267800 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38895588-38896587 Phaseolus vulgaris
Phvul.007G267800 1.0kb downstream 1.0kb downstream 3057 true Chr07: 38892531-38895587 Phaseolus vulgaris
Phvul.007G267800 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38892531-38893530 Phaseolus vulgaris
Phvul.007G267800 2.0kb upstream 2.0kb upstream 4057 true Chr07: 38893531-38897587 Phaseolus vulgaris
Phvul.007G267800 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38895588-38897587 Phaseolus vulgaris
Phvul.007G267800 2.0kb downstream 2.0kb downstream 4057 true Chr07: 38891531-38895587 Phaseolus vulgaris
Phvul.007G267800 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38891531-38893530 Phaseolus vulgaris
Phvul.007G267800 5.0kb upstream 5.0kb upstream 7057 true Chr07: 38893531-38900587 Phaseolus vulgaris
Phvul.007G267800 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38895588-38900587 Phaseolus vulgaris
Phvul.007G267800 5.0kb downstream 5.0kb downstream 7057 true Chr07: 38888531-38895587 Phaseolus vulgaris
Phvul.007G267800 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38888531-38893530 Phaseolus vulgaris
Phvul.007G267800 10.0kb upstream 10.0kb upstream 12057 true Chr07: 38893531-38905587 Phaseolus vulgaris
Phvul.007G267800 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38895588-38905587 Phaseolus vulgaris
Phvul.007G267800 10.0kb downstream 10.0kb downstream 12057 true Chr07: 38883531-38895587 Phaseolus vulgaris
Phvul.007G267800 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38883531-38893530 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306710 5265 Fabidae View MSA
124070283 5270 Rosid View MSA
123752134 5271 Pentapetalae View MSA
122795209 5272 Eudicot View MSA
122048631 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.644535 0.0 2.31472    
cufflinks 0.178301 0.0 0.71375 Low  
cufflinks 0.0688582 0.0 0.300117 Low  
cufflinks 0.203213 0.0 0.803224 Low  
cufflinks 0.0957643 0.0 0.403881 Low  
cufflinks 0.629677 0.0 2.27109    
cufflinks 1.1472 0.0 3.8615    
cufflinks 2.45979 0.0 7.64439   High
cufflinks 0.512008 0.0 1.87157    
cufflinks 0.0100817 0.0 0.0539258 Low Low
cufflinks 0.634354 0.0 2.28626    

0 Strain