Gene : Phvul.007G256900 P. vulgaris v2.1
Defline:  (1 of 6) PTHR12290 - CORNICHON-RELATED Genomic Order:  2426
Name:  ? Phvul.007G256900 Secondary Identifier:  ? PAC:37166120
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.007G256900 0.5kb upstream 0.5kb upstream 4466 true Chr07: 37851803-37856268 Phaseolus vulgaris
Phvul.007G256900 0.5kb upstream 0.5kb upstream 500 false Chr07: 37855769-37856268 Phaseolus vulgaris
Phvul.007G256900 0.5kb downstream 0.5kb downstream 4466 true Chr07: 37851303-37855768 Phaseolus vulgaris
Phvul.007G256900 0.5kb downstream 0.5kb downstream 500 false Chr07: 37851303-37851802 Phaseolus vulgaris
Phvul.007G256900 1.0kb upstream 1.0kb upstream 4966 true Chr07: 37851803-37856768 Phaseolus vulgaris
Phvul.007G256900 1.0kb upstream 1.0kb upstream 1000 false Chr07: 37855769-37856768 Phaseolus vulgaris
Phvul.007G256900 1.0kb downstream 1.0kb downstream 4966 true Chr07: 37850803-37855768 Phaseolus vulgaris
Phvul.007G256900 1.0kb downstream 1.0kb downstream 1000 false Chr07: 37850803-37851802 Phaseolus vulgaris
Phvul.007G256900 2.0kb upstream 2.0kb upstream 5966 true Chr07: 37851803-37857768 Phaseolus vulgaris
Phvul.007G256900 2.0kb upstream 2.0kb upstream 2000 false Chr07: 37855769-37857768 Phaseolus vulgaris
Phvul.007G256900 2.0kb downstream 2.0kb downstream 5966 true Chr07: 37849803-37855768 Phaseolus vulgaris
Phvul.007G256900 2.0kb downstream 2.0kb downstream 2000 false Chr07: 37849803-37851802 Phaseolus vulgaris
Phvul.007G256900 5.0kb upstream 5.0kb upstream 8966 true Chr07: 37851803-37860768 Phaseolus vulgaris
Phvul.007G256900 5.0kb upstream 5.0kb upstream 5000 false Chr07: 37855769-37860768 Phaseolus vulgaris
Phvul.007G256900 5.0kb downstream 5.0kb downstream 8966 true Chr07: 37846803-37855768 Phaseolus vulgaris
Phvul.007G256900 5.0kb downstream 5.0kb downstream 5000 false Chr07: 37846803-37851802 Phaseolus vulgaris
Phvul.007G256900 10.0kb upstream 10.0kb upstream 13966 true Chr07: 37851803-37865768 Phaseolus vulgaris
Phvul.007G256900 10.0kb upstream 10.0kb upstream 10000 false Chr07: 37855769-37865768 Phaseolus vulgaris
Phvul.007G256900 10.0kb downstream 10.0kb downstream 13966 true Chr07: 37841803-37855768 Phaseolus vulgaris
Phvul.007G256900 10.0kb downstream 10.0kb downstream 10000 false Chr07: 37841803-37851802 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311032 5265 Fabidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.86632 0.0 12.6448    
cufflinks 8.55486 0.0 25.7233   High
cufflinks 5.41206 0.0 17.0716    
cufflinks 6.88023 0.0 21.2613    
cufflinks 6.6709 0.0 20.7082    
cufflinks 3.80534 0.0 12.5506    
cufflinks 5.72161 0.0 18.1046    
cufflinks 5.44209 0.0 17.2432    
cufflinks 4.95757 0.0 16.0152    
cufflinks 1.91858 0.0 6.82109   Low
cufflinks 8.73642 0.0 26.3242   High

0 Strain