Gene : Phvul.005G117000 P. vulgaris v2.1
Defline:  (1 of 3) K09775 - hypothetical protein (K09775) Genomic Order:  1173
Name:  ? Phvul.005G117000 Secondary Identifier:  ? PAC:37153360
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.005G117000 0.5kb upstream 0.5kb upstream 3757 true Chr05: 35092901-35096657 Phaseolus vulgaris
Phvul.005G117000 0.5kb upstream 0.5kb upstream 500 false Chr05: 35096158-35096657 Phaseolus vulgaris
Phvul.005G117000 0.5kb downstream 0.5kb downstream 3757 true Chr05: 35092401-35096157 Phaseolus vulgaris
Phvul.005G117000 0.5kb downstream 0.5kb downstream 500 false Chr05: 35092401-35092900 Phaseolus vulgaris
Phvul.005G117000 1.0kb upstream 1.0kb upstream 4257 true Chr05: 35092901-35097157 Phaseolus vulgaris
Phvul.005G117000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35096158-35097157 Phaseolus vulgaris
Phvul.005G117000 1.0kb downstream 1.0kb downstream 4257 true Chr05: 35091901-35096157 Phaseolus vulgaris
Phvul.005G117000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35091901-35092900 Phaseolus vulgaris
Phvul.005G117000 2.0kb upstream 2.0kb upstream 5257 true Chr05: 35092901-35098157 Phaseolus vulgaris
Phvul.005G117000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35096158-35098157 Phaseolus vulgaris
Phvul.005G117000 2.0kb downstream 2.0kb downstream 5257 true Chr05: 35090901-35096157 Phaseolus vulgaris
Phvul.005G117000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35090901-35092900 Phaseolus vulgaris
Phvul.005G117000 5.0kb upstream 5.0kb upstream 8257 true Chr05: 35092901-35101157 Phaseolus vulgaris
Phvul.005G117000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35096158-35101157 Phaseolus vulgaris
Phvul.005G117000 5.0kb downstream 5.0kb downstream 8257 true Chr05: 35087901-35096157 Phaseolus vulgaris
Phvul.005G117000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35087901-35092900 Phaseolus vulgaris
Phvul.005G117000 10.0kb upstream 10.0kb upstream 13257 true Chr05: 35092901-35106157 Phaseolus vulgaris
Phvul.005G117000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35096158-35106157 Phaseolus vulgaris
Phvul.005G117000 10.0kb downstream 10.0kb downstream 13257 true Chr05: 35082901-35096157 Phaseolus vulgaris
Phvul.005G117000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35082901-35092900 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307761 5265 Fabidae View MSA
124064436 5270 Rosid View MSA
123747764 5271 Pentapetalae View MSA
122794192 5272 Eudicot View MSA
122050620 5273 Angiosperm View MSA
123429132 5275 Viridiplantae View MSA
121350526 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.082 0.0 132.043 High  
cufflinks 37.9567 0.0 98.5132 High  
cufflinks 32.0336 0.0 83.7173   Low
cufflinks 52.3949 0.0 135.436 High  
cufflinks 66.3358 0.0 171.893 High High
cufflinks 28.5972 0.0 75.2007   Low
cufflinks 42.9329 0.0 111.154 High  
cufflinks 25.9895 0.0 68.644   Low
cufflinks 56.918 0.0 147.165 High  
cufflinks 66.678 0.0 172.988 High High
cufflinks 52.0994 0.0 134.668 High  

0 Strain