Gene : Phvul.010G105200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR14155:SF71 - RING-H2 FINGER PROTEIN ATL67-RELATED Genomic Order:  1058
Name:  ? Phvul.010G105200 Secondary Identifier:  ? PAC:37144237
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G105200 0.5kb upstream 0.5kb upstream 1073 true Chr10: 37618651-37619723 Phaseolus vulgaris
Phvul.010G105200 0.5kb upstream 0.5kb upstream 500 false Chr10: 37618651-37619150 Phaseolus vulgaris
Phvul.010G105200 0.5kb downstream 0.5kb downstream 1073 true Chr10: 37619151-37620223 Phaseolus vulgaris
Phvul.010G105200 0.5kb downstream 0.5kb downstream 500 false Chr10: 37619724-37620223 Phaseolus vulgaris
Phvul.010G105200 1.0kb upstream 1.0kb upstream 1573 true Chr10: 37618151-37619723 Phaseolus vulgaris
Phvul.010G105200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 37618151-37619150 Phaseolus vulgaris
Phvul.010G105200 1.0kb downstream 1.0kb downstream 1573 true Chr10: 37619151-37620723 Phaseolus vulgaris
Phvul.010G105200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 37619724-37620723 Phaseolus vulgaris
Phvul.010G105200 2.0kb upstream 2.0kb upstream 2573 true Chr10: 37617151-37619723 Phaseolus vulgaris
Phvul.010G105200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 37617151-37619150 Phaseolus vulgaris
Phvul.010G105200 2.0kb downstream 2.0kb downstream 2573 true Chr10: 37619151-37621723 Phaseolus vulgaris
Phvul.010G105200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 37619724-37621723 Phaseolus vulgaris
Phvul.010G105200 5.0kb upstream 5.0kb upstream 5573 true Chr10: 37614151-37619723 Phaseolus vulgaris
Phvul.010G105200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 37614151-37619150 Phaseolus vulgaris
Phvul.010G105200 5.0kb downstream 5.0kb downstream 5573 true Chr10: 37619151-37624723 Phaseolus vulgaris
Phvul.010G105200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 37619724-37624723 Phaseolus vulgaris
Phvul.010G105200 10.0kb upstream 10.0kb upstream 10573 true Chr10: 37609151-37619723 Phaseolus vulgaris
Phvul.010G105200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 37609151-37619150 Phaseolus vulgaris
Phvul.010G105200 10.0kb downstream 10.0kb downstream 10573 true Chr10: 37619151-37629723 Phaseolus vulgaris
Phvul.010G105200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 37619724-37629723 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306965 5265 Fabidae View MSA
124062741 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.79189 0.0 22.0085    
cufflinks 4.89408 0.0 16.6207    
cufflinks 10.2125 0.0 32.214    
cufflinks 30.4846 0.0 82.5125   High
cufflinks 5.05846 0.0 16.8451    
cufflinks 15.6796 0.0 46.7569   High
cufflinks 5.86444 0.0 19.3506    
cufflinks 15.5609 0.0 46.8372    
cufflinks 3.09537 0.0 10.9195   Low
cufflinks 7.855 0.0 25.2549    
cufflinks 4.933 0.0 16.552    

0 Strain