Gene : Phvul.010G111700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Genomic Order:  1117
Name:  ? Phvul.010G111700 Secondary Identifier:  ? PAC:37142795
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G111700 0.5kb upstream 0.5kb upstream 4026 true Chr10: 38665575-38669600 Phaseolus vulgaris
Phvul.010G111700 0.5kb upstream 0.5kb upstream 500 false Chr10: 38665575-38666074 Phaseolus vulgaris
Phvul.010G111700 0.5kb downstream 0.5kb downstream 4026 true Chr10: 38666075-38670100 Phaseolus vulgaris
Phvul.010G111700 0.5kb downstream 0.5kb downstream 500 false Chr10: 38669601-38670100 Phaseolus vulgaris
Phvul.010G111700 1.0kb upstream 1.0kb upstream 4526 true Chr10: 38665075-38669600 Phaseolus vulgaris
Phvul.010G111700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 38665075-38666074 Phaseolus vulgaris
Phvul.010G111700 1.0kb downstream 1.0kb downstream 4526 true Chr10: 38666075-38670600 Phaseolus vulgaris
Phvul.010G111700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 38669601-38670600 Phaseolus vulgaris
Phvul.010G111700 2.0kb upstream 2.0kb upstream 5526 true Chr10: 38664075-38669600 Phaseolus vulgaris
Phvul.010G111700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 38664075-38666074 Phaseolus vulgaris
Phvul.010G111700 2.0kb downstream 2.0kb downstream 5526 true Chr10: 38666075-38671600 Phaseolus vulgaris
Phvul.010G111700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 38669601-38671600 Phaseolus vulgaris
Phvul.010G111700 5.0kb upstream 5.0kb upstream 8526 true Chr10: 38661075-38669600 Phaseolus vulgaris
Phvul.010G111700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 38661075-38666074 Phaseolus vulgaris
Phvul.010G111700 5.0kb downstream 5.0kb downstream 8526 true Chr10: 38666075-38674600 Phaseolus vulgaris
Phvul.010G111700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 38669601-38674600 Phaseolus vulgaris
Phvul.010G111700 10.0kb upstream 10.0kb upstream 13526 true Chr10: 38656075-38669600 Phaseolus vulgaris
Phvul.010G111700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 38656075-38666074 Phaseolus vulgaris
Phvul.010G111700 10.0kb downstream 10.0kb downstream 13526 true Chr10: 38666075-38679600 Phaseolus vulgaris
Phvul.010G111700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 38669601-38679600 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304359 5265 Fabidae View MSA
124060800 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.87053 0.0 14.4085    
cufflinks 1.09158 0.0 6.43375    
cufflinks 7.42139 0.0 29.6012    
cufflinks 2.28614 0.0 7.93177    
cufflinks 8.4 0.0 34.0435    
cufflinks 12.9287 0.0 46.7474   High
cufflinks 0.822313 0.0 3.59855    
cufflinks 0.455137 0.0 2.14946   Low
cufflinks 0.930107 0.0 4.01736    
cufflinks 0.174522 0.0 0.707467 Low Low
cufflinks 11.5594 0.0 44.0154   High

0 Strain