Gene : Phvul.010G100100 P. vulgaris v2.1
Defline:  (1 of 3) K11647 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:3.6.4.-] (SMARCA2_4) Genomic Order:  1006
Name:  ? Phvul.010G100100 Secondary Identifier:  ? PAC:37142203
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G100100 0.5kb upstream 0.5kb upstream 13540 true Chr10: 36722467-36736006 Phaseolus vulgaris
Phvul.010G100100 0.5kb upstream 0.5kb upstream 500 false Chr10: 36722467-36722966 Phaseolus vulgaris
Phvul.010G100100 0.5kb downstream 0.5kb downstream 13540 true Chr10: 36722967-36736506 Phaseolus vulgaris
Phvul.010G100100 0.5kb downstream 0.5kb downstream 500 false Chr10: 36736007-36736506 Phaseolus vulgaris
Phvul.010G100100 1.0kb upstream 1.0kb upstream 14040 true Chr10: 36721967-36736006 Phaseolus vulgaris
Phvul.010G100100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 36721967-36722966 Phaseolus vulgaris
Phvul.010G100100 1.0kb downstream 1.0kb downstream 14040 true Chr10: 36722967-36737006 Phaseolus vulgaris
Phvul.010G100100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 36736007-36737006 Phaseolus vulgaris
Phvul.010G100100 2.0kb upstream 2.0kb upstream 15040 true Chr10: 36720967-36736006 Phaseolus vulgaris
Phvul.010G100100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 36720967-36722966 Phaseolus vulgaris
Phvul.010G100100 2.0kb downstream 2.0kb downstream 15040 true Chr10: 36722967-36738006 Phaseolus vulgaris
Phvul.010G100100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 36736007-36738006 Phaseolus vulgaris
Phvul.010G100100 5.0kb upstream 5.0kb upstream 18040 true Chr10: 36717967-36736006 Phaseolus vulgaris
Phvul.010G100100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 36717967-36722966 Phaseolus vulgaris
Phvul.010G100100 5.0kb downstream 5.0kb downstream 18040 true Chr10: 36722967-36741006 Phaseolus vulgaris
Phvul.010G100100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 36736007-36741006 Phaseolus vulgaris
Phvul.010G100100 10.0kb upstream 10.0kb upstream 23040 true Chr10: 36712967-36736006 Phaseolus vulgaris
Phvul.010G100100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 36712967-36722966 Phaseolus vulgaris
Phvul.010G100100 10.0kb downstream 10.0kb downstream 23040 true Chr10: 36722967-36746006 Phaseolus vulgaris
Phvul.010G100100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 36736007-36746006 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304569 5265 Fabidae View MSA
124061210 5270 Rosid View MSA
123746200 5271 Pentapetalae View MSA
122788143 5272 Eudicot View MSA
122044493 5273 Angiosperm View MSA
121349128 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.75348 0.0 4.76015   Low
cufflinks 5.03518 0.0 13.015    
cufflinks 11.9676 0.0 32.0842    
cufflinks 1.81533 0.0 4.94338   Low
cufflinks 7.77991 0.0 20.2326    
cufflinks 13.2338 0.0 35.7717    
cufflinks 12.6039 0.0 33.9948    
cufflinks 10.5491 0.0 28.1036    
cufflinks 9.90532 0.0 26.2082    
cufflinks 18.3576 0.0 51.1267   High
cufflinks 5.06013 0.0 13.0802    

0 Strain