Gene : Phvul.010G083200 P. vulgaris v2.1
Defline:  (1 of 10) PTHR22937//PTHR22937:SF48 - RING FINGER CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  919
Name:  ? Phvul.010G083200 Secondary Identifier:  ? PAC:37143340
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G083200 0.5kb upstream 0.5kb upstream 1255 true Chr10: 34943184-34944438 Phaseolus vulgaris
Phvul.010G083200 0.5kb upstream 0.5kb upstream 500 false Chr10: 34943939-34944438 Phaseolus vulgaris
Phvul.010G083200 0.5kb downstream 0.5kb downstream 1255 true Chr10: 34942684-34943938 Phaseolus vulgaris
Phvul.010G083200 0.5kb downstream 0.5kb downstream 500 false Chr10: 34942684-34943183 Phaseolus vulgaris
Phvul.010G083200 1.0kb upstream 1.0kb upstream 1755 true Chr10: 34943184-34944938 Phaseolus vulgaris
Phvul.010G083200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 34943939-34944938 Phaseolus vulgaris
Phvul.010G083200 1.0kb downstream 1.0kb downstream 1755 true Chr10: 34942184-34943938 Phaseolus vulgaris
Phvul.010G083200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 34942184-34943183 Phaseolus vulgaris
Phvul.010G083200 2.0kb upstream 2.0kb upstream 2755 true Chr10: 34943184-34945938 Phaseolus vulgaris
Phvul.010G083200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 34943939-34945938 Phaseolus vulgaris
Phvul.010G083200 2.0kb downstream 2.0kb downstream 2755 true Chr10: 34941184-34943938 Phaseolus vulgaris
Phvul.010G083200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 34941184-34943183 Phaseolus vulgaris
Phvul.010G083200 5.0kb upstream 5.0kb upstream 5755 true Chr10: 34943184-34948938 Phaseolus vulgaris
Phvul.010G083200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 34943939-34948938 Phaseolus vulgaris
Phvul.010G083200 5.0kb downstream 5.0kb downstream 5755 true Chr10: 34938184-34943938 Phaseolus vulgaris
Phvul.010G083200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 34938184-34943183 Phaseolus vulgaris
Phvul.010G083200 10.0kb upstream 10.0kb upstream 10755 true Chr10: 34943184-34953938 Phaseolus vulgaris
Phvul.010G083200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 34943939-34953938 Phaseolus vulgaris
Phvul.010G083200 10.0kb downstream 10.0kb downstream 10755 true Chr10: 34933184-34943938 Phaseolus vulgaris
Phvul.010G083200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 34933184-34943183 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313981 5265 Fabidae View MSA
124074559 5270 Rosid View MSA
123753748 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185401 0.0 0.85338 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.46111 0.0 9.0663   High
cufflinks 0.49558 0.0 2.09009 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00108263 0.0 0.0224302 Low  
cufflinks 0.336227 0.0 1.46021 Low  
cufflinks 1.23899E-5 0.0 0.00236189 Low Low
cufflinks 0.00149325 0.0 0.0274244 Low  

0 Strain