Gene : Phvul.010G087100 P. vulgaris v2.1
Defline:  (1 of 3) 1.1.1.79//1.1.1.81 - Hydroxypyruvate reductase / D-glycerate dehydrogenase Genomic Order:  865
Name:  ? Phvul.010G087100 Secondary Identifier:  ? PAC:37143259
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G087100 0.5kb upstream 0.5kb upstream 2949 true Chr10: 33296509-33299457 Phaseolus vulgaris
Phvul.010G087100 0.5kb upstream 0.5kb upstream 500 false Chr10: 33296509-33297008 Phaseolus vulgaris
Phvul.010G087100 0.5kb downstream 0.5kb downstream 2949 true Chr10: 33297009-33299957 Phaseolus vulgaris
Phvul.010G087100 0.5kb downstream 0.5kb downstream 500 false Chr10: 33299458-33299957 Phaseolus vulgaris
Phvul.010G087100 1.0kb upstream 1.0kb upstream 3449 true Chr10: 33296009-33299457 Phaseolus vulgaris
Phvul.010G087100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 33296009-33297008 Phaseolus vulgaris
Phvul.010G087100 1.0kb downstream 1.0kb downstream 3449 true Chr10: 33297009-33300457 Phaseolus vulgaris
Phvul.010G087100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 33299458-33300457 Phaseolus vulgaris
Phvul.010G087100 2.0kb upstream 2.0kb upstream 4449 true Chr10: 33295009-33299457 Phaseolus vulgaris
Phvul.010G087100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 33295009-33297008 Phaseolus vulgaris
Phvul.010G087100 2.0kb downstream 2.0kb downstream 4449 true Chr10: 33297009-33301457 Phaseolus vulgaris
Phvul.010G087100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 33299458-33301457 Phaseolus vulgaris
Phvul.010G087100 5.0kb upstream 5.0kb upstream 7449 true Chr10: 33292009-33299457 Phaseolus vulgaris
Phvul.010G087100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 33292009-33297008 Phaseolus vulgaris
Phvul.010G087100 5.0kb downstream 5.0kb downstream 7449 true Chr10: 33297009-33304457 Phaseolus vulgaris
Phvul.010G087100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 33299458-33304457 Phaseolus vulgaris
Phvul.010G087100 10.0kb upstream 10.0kb upstream 12449 true Chr10: 33287009-33299457 Phaseolus vulgaris
Phvul.010G087100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 33287009-33297008 Phaseolus vulgaris
Phvul.010G087100 10.0kb downstream 10.0kb downstream 12449 true Chr10: 33297009-33309457 Phaseolus vulgaris
Phvul.010G087100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 33299458-33309457 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307484 5265 Fabidae View MSA
124074287 5270 Rosid View MSA
123747917 5271 Pentapetalae View MSA
122795795 5272 Eudicot View MSA
122049787 5273 Angiosperm View MSA
121349350 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.315 0.0 10.493    
cufflinks 7.61211 0.0 21.9762    
cufflinks 3.61982 0.0 11.3991    
cufflinks 8.21873 0.0 23.5708   High
cufflinks 6.90868 0.0 20.1738    
cufflinks 2.68311 0.0 8.72332    
cufflinks 1.32198 0.0 4.63574   Low
cufflinks 0.523771 0.0 1.99737   Low
cufflinks 3.43944 0.0 10.8795    
cufflinks 2.05188 0.0 6.8549    
cufflinks 7.95826 0.0 22.8216   High

0 Strain