Gene : Phvul.006G032800 P. vulgaris v2.1
Defline:  (1 of 4) PTHR32227:SF127 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Genomic Order:  281
Name:  ? Phvul.006G032800 Secondary Identifier:  ? PAC:37173051
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G032800 0.5kb upstream 0.5kb upstream 3919 true Chr06: 12453808-12457726 Phaseolus vulgaris
Phvul.006G032800 0.5kb upstream 0.5kb upstream 500 false Chr06: 12453808-12454307 Phaseolus vulgaris
Phvul.006G032800 0.5kb downstream 0.5kb downstream 3919 true Chr06: 12454308-12458226 Phaseolus vulgaris
Phvul.006G032800 0.5kb downstream 0.5kb downstream 500 false Chr06: 12457727-12458226 Phaseolus vulgaris
Phvul.006G032800 1.0kb upstream 1.0kb upstream 4419 true Chr06: 12453308-12457726 Phaseolus vulgaris
Phvul.006G032800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12453308-12454307 Phaseolus vulgaris
Phvul.006G032800 1.0kb downstream 1.0kb downstream 4419 true Chr06: 12454308-12458726 Phaseolus vulgaris
Phvul.006G032800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12457727-12458726 Phaseolus vulgaris
Phvul.006G032800 2.0kb upstream 2.0kb upstream 5419 true Chr06: 12452308-12457726 Phaseolus vulgaris
Phvul.006G032800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12452308-12454307 Phaseolus vulgaris
Phvul.006G032800 2.0kb downstream 2.0kb downstream 5419 true Chr06: 12454308-12459726 Phaseolus vulgaris
Phvul.006G032800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12457727-12459726 Phaseolus vulgaris
Phvul.006G032800 5.0kb upstream 5.0kb upstream 8419 true Chr06: 12449308-12457726 Phaseolus vulgaris
Phvul.006G032800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12449308-12454307 Phaseolus vulgaris
Phvul.006G032800 5.0kb downstream 5.0kb downstream 8419 true Chr06: 12454308-12462726 Phaseolus vulgaris
Phvul.006G032800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12457727-12462726 Phaseolus vulgaris
Phvul.006G032800 10.0kb upstream 10.0kb upstream 13419 true Chr06: 12444308-12457726 Phaseolus vulgaris
Phvul.006G032800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12444308-12454307 Phaseolus vulgaris
Phvul.006G032800 10.0kb downstream 10.0kb downstream 13419 true Chr06: 12454308-12467726 Phaseolus vulgaris
Phvul.006G032800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12457727-12467726 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312600 5265 Fabidae View MSA
124061079 5270 Rosid View MSA
123753343 5271 Pentapetalae View MSA
122794093 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.14883 0.0 4.1484   Low
cufflinks 3.94561 0.0 12.421    
cufflinks 5.45685 0.0 16.4662    
cufflinks 3.27796 0.0 10.5104    
cufflinks 9.22752 0.0 26.5488    
cufflinks 5.6175 0.0 16.9654    
cufflinks 22.9168 0.0 60.6437   High
cufflinks 27.9512 0.0 73.0378 High High
cufflinks 11.5435 0.0 32.2667    
cufflinks 2.70358 0.0 8.9082    
cufflinks 10.3233 0.0 29.3583    

0 Strain