Gene : Phvul.006G036500 P. vulgaris v2.1
Defline:  (1 of 2) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) Genomic Order:  365
Name:  ? Phvul.006G036500 Secondary Identifier:  ? PAC:37171851
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G036500 0.5kb upstream 0.5kb upstream 16895 true Chr06: 14330185-14347079 Phaseolus vulgaris
Phvul.006G036500 0.5kb upstream 0.5kb upstream 500 false Chr06: 14346580-14347079 Phaseolus vulgaris
Phvul.006G036500 0.5kb downstream 0.5kb downstream 16895 true Chr06: 14329685-14346579 Phaseolus vulgaris
Phvul.006G036500 0.5kb downstream 0.5kb downstream 500 false Chr06: 14329685-14330184 Phaseolus vulgaris
Phvul.006G036500 1.0kb upstream 1.0kb upstream 17395 true Chr06: 14330185-14347579 Phaseolus vulgaris
Phvul.006G036500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14346580-14347579 Phaseolus vulgaris
Phvul.006G036500 1.0kb downstream 1.0kb downstream 17395 true Chr06: 14329185-14346579 Phaseolus vulgaris
Phvul.006G036500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14329185-14330184 Phaseolus vulgaris
Phvul.006G036500 2.0kb upstream 2.0kb upstream 18395 true Chr06: 14330185-14348579 Phaseolus vulgaris
Phvul.006G036500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14346580-14348579 Phaseolus vulgaris
Phvul.006G036500 2.0kb downstream 2.0kb downstream 18395 true Chr06: 14328185-14346579 Phaseolus vulgaris
Phvul.006G036500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14328185-14330184 Phaseolus vulgaris
Phvul.006G036500 5.0kb upstream 5.0kb upstream 21395 true Chr06: 14330185-14351579 Phaseolus vulgaris
Phvul.006G036500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14346580-14351579 Phaseolus vulgaris
Phvul.006G036500 5.0kb downstream 5.0kb downstream 21395 true Chr06: 14325185-14346579 Phaseolus vulgaris
Phvul.006G036500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14325185-14330184 Phaseolus vulgaris
Phvul.006G036500 10.0kb upstream 10.0kb upstream 26395 true Chr06: 14330185-14356579 Phaseolus vulgaris
Phvul.006G036500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14346580-14356579 Phaseolus vulgaris
Phvul.006G036500 10.0kb downstream 10.0kb downstream 26395 true Chr06: 14320185-14346579 Phaseolus vulgaris
Phvul.006G036500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14320185-14330184 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122252118 5265 Fabidae Singleton cluster - no MSA
124041348 5270 Rosid View MSA
123746125 5271 Pentapetalae View MSA
122786380 5272 Eudicot View MSA
122051463 5273 Angiosperm View MSA
121344738 5274 Embryophyte View MSA
123424487 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.00946 0.0 5.67389    
cufflinks 0.961171 0.0 5.45393    
cufflinks 2.33653 0.0 8.17608    
cufflinks 2.6775 0.0 11.7612   High
cufflinks 1.32198 0.0 7.19143    
cufflinks 1.08808 0.0 4.55746    
cufflinks 1.46395 0.0 7.40786    
cufflinks 3.04846 0.0 12.6598   High
cufflinks 1.95544 0.0 9.18426    
cufflinks 1.46319 0.0 8.87198    
cufflinks 0.72851 0.0 4.44086   Low

0 Strain