Gene : Phvul.010G072900 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31636:SF11 - SCARECROW-LIKE PROTEIN 22-RELATED Genomic Order:  679
Name:  ? Phvul.010G072900 Secondary Identifier:  ? PAC:37143299
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G072900 0.5kb upstream 0.5kb upstream 4357 true Chr10: 17098374-17102730 Phaseolus vulgaris
Phvul.010G072900 0.5kb upstream 0.5kb upstream 500 false Chr10: 17098374-17098873 Phaseolus vulgaris
Phvul.010G072900 0.5kb downstream 0.5kb downstream 4357 true Chr10: 17098874-17103230 Phaseolus vulgaris
Phvul.010G072900 0.5kb downstream 0.5kb downstream 500 false Chr10: 17102731-17103230 Phaseolus vulgaris
Phvul.010G072900 1.0kb upstream 1.0kb upstream 4857 true Chr10: 17097874-17102730 Phaseolus vulgaris
Phvul.010G072900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 17097874-17098873 Phaseolus vulgaris
Phvul.010G072900 1.0kb downstream 1.0kb downstream 4857 true Chr10: 17098874-17103730 Phaseolus vulgaris
Phvul.010G072900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 17102731-17103730 Phaseolus vulgaris
Phvul.010G072900 2.0kb upstream 2.0kb upstream 5857 true Chr10: 17096874-17102730 Phaseolus vulgaris
Phvul.010G072900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 17096874-17098873 Phaseolus vulgaris
Phvul.010G072900 2.0kb downstream 2.0kb downstream 5857 true Chr10: 17098874-17104730 Phaseolus vulgaris
Phvul.010G072900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 17102731-17104730 Phaseolus vulgaris
Phvul.010G072900 5.0kb upstream 5.0kb upstream 8857 true Chr10: 17093874-17102730 Phaseolus vulgaris
Phvul.010G072900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 17093874-17098873 Phaseolus vulgaris
Phvul.010G072900 5.0kb downstream 5.0kb downstream 8857 true Chr10: 17098874-17107730 Phaseolus vulgaris
Phvul.010G072900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 17102731-17107730 Phaseolus vulgaris
Phvul.010G072900 10.0kb upstream 10.0kb upstream 13857 true Chr10: 17088874-17102730 Phaseolus vulgaris
Phvul.010G072900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 17088874-17098873 Phaseolus vulgaris
Phvul.010G072900 10.0kb downstream 10.0kb downstream 13857 true Chr10: 17098874-17112730 Phaseolus vulgaris
Phvul.010G072900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 17102731-17112730 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253972 5265 Fabidae View MSA
124067297 5270 Rosid View MSA
123748991 5271 Pentapetalae View MSA
122793941 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.75225 0.0 20.6103   Low
cufflinks 9.84277 0.0 25.7938    
cufflinks 12.8096 0.0 33.2009    
cufflinks 7.81922 0.0 20.8124   Low
cufflinks 9.73238 0.0 25.5263    
cufflinks 11.8227 0.0 30.7299    
cufflinks 11.8389 0.0 30.7614    
cufflinks 15.4509 0.0 39.9455   High
cufflinks 17.0353 0.0 44.0332   High
cufflinks 11.5158 0.0 29.9779    
cufflinks 11.1368 0.0 29.0451    

0 Strain