Gene : Phvul.006G020500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR24056:SF227 - CYCLIN-DEPENDENT KINASE C-2 Genomic Order:  155
Name:  ? Phvul.006G020500 Secondary Identifier:  ? PAC:37173834
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G020500 0.5kb upstream 0.5kb upstream 10012 true Chr06: 8559380-8569391 Phaseolus vulgaris
Phvul.006G020500 0.5kb upstream 0.5kb upstream 500 false Chr06: 8568892-8569391 Phaseolus vulgaris
Phvul.006G020500 0.5kb downstream 0.5kb downstream 10012 true Chr06: 8558880-8568891 Phaseolus vulgaris
Phvul.006G020500 0.5kb downstream 0.5kb downstream 500 false Chr06: 8558880-8559379 Phaseolus vulgaris
Phvul.006G020500 1.0kb upstream 1.0kb upstream 10512 true Chr06: 8559380-8569891 Phaseolus vulgaris
Phvul.006G020500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8568892-8569891 Phaseolus vulgaris
Phvul.006G020500 1.0kb downstream 1.0kb downstream 10512 true Chr06: 8558380-8568891 Phaseolus vulgaris
Phvul.006G020500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8558380-8559379 Phaseolus vulgaris
Phvul.006G020500 2.0kb upstream 2.0kb upstream 11512 true Chr06: 8559380-8570891 Phaseolus vulgaris
Phvul.006G020500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8568892-8570891 Phaseolus vulgaris
Phvul.006G020500 2.0kb downstream 2.0kb downstream 11512 true Chr06: 8557380-8568891 Phaseolus vulgaris
Phvul.006G020500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8557380-8559379 Phaseolus vulgaris
Phvul.006G020500 5.0kb upstream 5.0kb upstream 14512 true Chr06: 8559380-8573891 Phaseolus vulgaris
Phvul.006G020500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8568892-8573891 Phaseolus vulgaris
Phvul.006G020500 5.0kb downstream 5.0kb downstream 14512 true Chr06: 8554380-8568891 Phaseolus vulgaris
Phvul.006G020500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8554380-8559379 Phaseolus vulgaris
Phvul.006G020500 10.0kb upstream 10.0kb upstream 19512 true Chr06: 8559380-8578891 Phaseolus vulgaris
Phvul.006G020500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8568892-8578891 Phaseolus vulgaris
Phvul.006G020500 10.0kb downstream 10.0kb downstream 19512 true Chr06: 8549380-8568891 Phaseolus vulgaris
Phvul.006G020500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8549380-8559379 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302449 5265 Fabidae View MSA
124061566 5270 Rosid View MSA
123744751 5271 Pentapetalae View MSA
122788192 5272 Eudicot View MSA
122043728 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121346780 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.8763 0.0 33.5116   Low
cufflinks 16.0761 0.0 44.8274   High
cufflinks 15.9217 0.0 44.5084    
cufflinks 11.0079 0.0 31.3985   Low
cufflinks 13.8815 0.0 38.8919    
cufflinks 15.0453 0.0 42.1278    
cufflinks 13.822 0.0 38.5173    
cufflinks 12.8561 0.0 36.0746    
cufflinks 12.737 0.0 35.7318    
cufflinks 16.6843 0.0 46.5986   High
cufflinks 15.2766 0.0 42.5811    

0 Strain