Gene : Phvul.010G075500 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10641:SF524 - ATMYB1 PROTEIN Genomic Order:  796
Name:  ? Phvul.010G075500 Secondary Identifier:  ? PAC:37143275
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G075500 0.5kb upstream 0.5kb upstream 10845 true Chr10: 28282709-28293553 Phaseolus vulgaris
Phvul.010G075500 0.5kb upstream 0.5kb upstream 500 false Chr10: 28282709-28283208 Phaseolus vulgaris
Phvul.010G075500 0.5kb downstream 0.5kb downstream 10845 true Chr10: 28283209-28294053 Phaseolus vulgaris
Phvul.010G075500 0.5kb downstream 0.5kb downstream 500 false Chr10: 28293554-28294053 Phaseolus vulgaris
Phvul.010G075500 1.0kb upstream 1.0kb upstream 11345 true Chr10: 28282209-28293553 Phaseolus vulgaris
Phvul.010G075500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 28282209-28283208 Phaseolus vulgaris
Phvul.010G075500 1.0kb downstream 1.0kb downstream 11345 true Chr10: 28283209-28294553 Phaseolus vulgaris
Phvul.010G075500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 28293554-28294553 Phaseolus vulgaris
Phvul.010G075500 2.0kb upstream 2.0kb upstream 12345 true Chr10: 28281209-28293553 Phaseolus vulgaris
Phvul.010G075500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 28281209-28283208 Phaseolus vulgaris
Phvul.010G075500 2.0kb downstream 2.0kb downstream 12345 true Chr10: 28283209-28295553 Phaseolus vulgaris
Phvul.010G075500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 28293554-28295553 Phaseolus vulgaris
Phvul.010G075500 5.0kb upstream 5.0kb upstream 15345 true Chr10: 28278209-28293553 Phaseolus vulgaris
Phvul.010G075500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 28278209-28283208 Phaseolus vulgaris
Phvul.010G075500 5.0kb downstream 5.0kb downstream 15345 true Chr10: 28283209-28298553 Phaseolus vulgaris
Phvul.010G075500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 28293554-28298553 Phaseolus vulgaris
Phvul.010G075500 10.0kb upstream 10.0kb upstream 20345 true Chr10: 28273209-28293553 Phaseolus vulgaris
Phvul.010G075500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 28273209-28283208 Phaseolus vulgaris
Phvul.010G075500 10.0kb downstream 10.0kb downstream 20345 true Chr10: 28283209-28303553 Phaseolus vulgaris
Phvul.010G075500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 28293554-28303553 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300795 5265 Fabidae View MSA
124065545 5270 Rosid View MSA
123745046 5271 Pentapetalae View MSA
122792993 5272 Eudicot View MSA
122045761 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121346052 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.32239 0.0 18.0073    
cufflinks 7.87873 0.0 21.9554   High
cufflinks 4.11782 0.0 12.2848   Low
cufflinks 7.7637 0.0 21.6777   High
cufflinks 5.70809 0.0 16.412    
cufflinks 4.98808 0.0 14.5517    
cufflinks 4.57615 0.0 13.4036   Low
cufflinks 5.45255 0.0 15.7261    
cufflinks 5.4003 0.0 15.5546    
cufflinks 6.83586 0.0 19.2628    
cufflinks 6.84954 0.0 19.2916    

0 Strain