Gene : Phvul.006G012900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR22951:SF26 - CLATHRIN COAT ASSEMBLY PROTEIN AP180 Genomic Order:  108
Name:  ? Phvul.006G012900 Secondary Identifier:  ? PAC:37174144
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G012900 0.5kb upstream 0.5kb upstream 2798 true Chr06: 5746237-5749034 Phaseolus vulgaris
Phvul.006G012900 0.5kb upstream 0.5kb upstream 500 false Chr06: 5746237-5746736 Phaseolus vulgaris
Phvul.006G012900 0.5kb downstream 0.5kb downstream 2798 true Chr06: 5746737-5749534 Phaseolus vulgaris
Phvul.006G012900 0.5kb downstream 0.5kb downstream 500 false Chr06: 5749035-5749534 Phaseolus vulgaris
Phvul.006G012900 1.0kb upstream 1.0kb upstream 3298 true Chr06: 5745737-5749034 Phaseolus vulgaris
Phvul.006G012900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5745737-5746736 Phaseolus vulgaris
Phvul.006G012900 1.0kb downstream 1.0kb downstream 3298 true Chr06: 5746737-5750034 Phaseolus vulgaris
Phvul.006G012900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5749035-5750034 Phaseolus vulgaris
Phvul.006G012900 2.0kb upstream 2.0kb upstream 4298 true Chr06: 5744737-5749034 Phaseolus vulgaris
Phvul.006G012900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5744737-5746736 Phaseolus vulgaris
Phvul.006G012900 2.0kb downstream 2.0kb downstream 4298 true Chr06: 5746737-5751034 Phaseolus vulgaris
Phvul.006G012900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5749035-5751034 Phaseolus vulgaris
Phvul.006G012900 5.0kb upstream 5.0kb upstream 7298 true Chr06: 5741737-5749034 Phaseolus vulgaris
Phvul.006G012900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5741737-5746736 Phaseolus vulgaris
Phvul.006G012900 5.0kb downstream 5.0kb downstream 7298 true Chr06: 5746737-5754034 Phaseolus vulgaris
Phvul.006G012900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5749035-5754034 Phaseolus vulgaris
Phvul.006G012900 10.0kb upstream 10.0kb upstream 12298 true Chr06: 5736737-5749034 Phaseolus vulgaris
Phvul.006G012900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5736737-5746736 Phaseolus vulgaris
Phvul.006G012900 10.0kb downstream 10.0kb downstream 12298 true Chr06: 5746737-5759034 Phaseolus vulgaris
Phvul.006G012900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5749035-5759034 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299561 5265 Fabidae View MSA
124064845 5270 Rosid View MSA
123748720 5271 Pentapetalae View MSA
122791986 5272 Eudicot View MSA
122050883 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.466182 0.0 1.71947   High
cufflinks 0.0839783 0.0 0.356038 Low  
cufflinks 0.149143 0.0 0.600439 Low  
cufflinks 0.310566 0.0 1.18933 Low High
cufflinks 0.031889 0.0 0.149737 Low  
cufflinks 0.068849 0.0 0.297078 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0429546 0.0 0.193463 Low  
cufflinks 0.0220738 0.0 0.107216 Low Low
cufflinks 0.0283529 0.0 0.133953 Low  
cufflinks 0.0382775 0.0 0.176352 Low  

0 Strain