Gene : Phvul.006G013100 P. vulgaris v2.1
Defline:  (1 of 1) K14001 - nucleotide exchange factor SIL1 (SIL1, SLS1) Genomic Order:  106
Name:  ? Phvul.006G013100 Secondary Identifier:  ? PAC:37172589
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G013100 0.5kb upstream 0.5kb upstream 5677 true Chr06: 5647468-5653144 Phaseolus vulgaris
Phvul.006G013100 0.5kb upstream 0.5kb upstream 500 false Chr06: 5647468-5647967 Phaseolus vulgaris
Phvul.006G013100 0.5kb downstream 0.5kb downstream 5677 true Chr06: 5647968-5653644 Phaseolus vulgaris
Phvul.006G013100 0.5kb downstream 0.5kb downstream 500 false Chr06: 5653145-5653644 Phaseolus vulgaris
Phvul.006G013100 1.0kb upstream 1.0kb upstream 6177 true Chr06: 5646968-5653144 Phaseolus vulgaris
Phvul.006G013100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 5646968-5647967 Phaseolus vulgaris
Phvul.006G013100 1.0kb downstream 1.0kb downstream 6177 true Chr06: 5647968-5654144 Phaseolus vulgaris
Phvul.006G013100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 5653145-5654144 Phaseolus vulgaris
Phvul.006G013100 2.0kb upstream 2.0kb upstream 7177 true Chr06: 5645968-5653144 Phaseolus vulgaris
Phvul.006G013100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 5645968-5647967 Phaseolus vulgaris
Phvul.006G013100 2.0kb downstream 2.0kb downstream 7177 true Chr06: 5647968-5655144 Phaseolus vulgaris
Phvul.006G013100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 5653145-5655144 Phaseolus vulgaris
Phvul.006G013100 5.0kb upstream 5.0kb upstream 10177 true Chr06: 5642968-5653144 Phaseolus vulgaris
Phvul.006G013100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 5642968-5647967 Phaseolus vulgaris
Phvul.006G013100 5.0kb downstream 5.0kb downstream 10177 true Chr06: 5647968-5658144 Phaseolus vulgaris
Phvul.006G013100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 5653145-5658144 Phaseolus vulgaris
Phvul.006G013100 10.0kb upstream 10.0kb upstream 15177 true Chr06: 5637968-5653144 Phaseolus vulgaris
Phvul.006G013100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 5637968-5647967 Phaseolus vulgaris
Phvul.006G013100 10.0kb downstream 10.0kb downstream 15177 true Chr06: 5647968-5663144 Phaseolus vulgaris
Phvul.006G013100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5653145-5663144 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308573 5265 Fabidae View MSA
124065621 5270 Rosid View MSA
123748687 5271 Pentapetalae View MSA
122785799 5272 Eudicot View MSA
122044070 5273 Angiosperm View MSA
121347280 5274 Embryophyte View MSA
123426029 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.40188 0.0 32.5496    
cufflinks 8.42873 0.0 37.3331    
cufflinks 3.32057 0.0 20.9845   Low
cufflinks 11.0933 0.0 45.723   High
cufflinks 3.94794 0.0 18.256   Low
cufflinks 4.15411 0.0 18.4759    
cufflinks 5.87413 0.0 24.7524    
cufflinks 7.70717 0.0 29.7266    
cufflinks 5.7291 0.0 25.5631    
cufflinks 6.8727 0.0 30.5309    
cufflinks 4.38908 0.0 20.4757    

0 Strain