Gene : Phvul.010G060900 P. vulgaris v2.1
Defline:  (1 of 11) PF05097 - Protein of unknown function (DUF688) (DUF688) Genomic Order:  579
Name:  ? Phvul.010G060900 Secondary Identifier:  ? PAC:37142499
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G060900 0.5kb upstream 0.5kb upstream 1307 true Chr10: 9523232-9524538 Phaseolus vulgaris
Phvul.010G060900 0.5kb upstream 0.5kb upstream 500 false Chr10: 9524039-9524538 Phaseolus vulgaris
Phvul.010G060900 0.5kb downstream 0.5kb downstream 1307 true Chr10: 9522732-9524038 Phaseolus vulgaris
Phvul.010G060900 0.5kb downstream 0.5kb downstream 500 false Chr10: 9522732-9523231 Phaseolus vulgaris
Phvul.010G060900 1.0kb upstream 1.0kb upstream 1807 true Chr10: 9523232-9525038 Phaseolus vulgaris
Phvul.010G060900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 9524039-9525038 Phaseolus vulgaris
Phvul.010G060900 1.0kb downstream 1.0kb downstream 1807 true Chr10: 9522232-9524038 Phaseolus vulgaris
Phvul.010G060900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 9522232-9523231 Phaseolus vulgaris
Phvul.010G060900 2.0kb upstream 2.0kb upstream 2807 true Chr10: 9523232-9526038 Phaseolus vulgaris
Phvul.010G060900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 9524039-9526038 Phaseolus vulgaris
Phvul.010G060900 2.0kb downstream 2.0kb downstream 2807 true Chr10: 9521232-9524038 Phaseolus vulgaris
Phvul.010G060900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 9521232-9523231 Phaseolus vulgaris
Phvul.010G060900 5.0kb upstream 5.0kb upstream 5807 true Chr10: 9523232-9529038 Phaseolus vulgaris
Phvul.010G060900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 9524039-9529038 Phaseolus vulgaris
Phvul.010G060900 5.0kb downstream 5.0kb downstream 5807 true Chr10: 9518232-9524038 Phaseolus vulgaris
Phvul.010G060900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 9518232-9523231 Phaseolus vulgaris
Phvul.010G060900 10.0kb upstream 10.0kb upstream 10807 true Chr10: 9523232-9534038 Phaseolus vulgaris
Phvul.010G060900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 9524039-9534038 Phaseolus vulgaris
Phvul.010G060900 10.0kb downstream 10.0kb downstream 10807 true Chr10: 9513232-9524038 Phaseolus vulgaris
Phvul.010G060900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 9513232-9523231 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029269 5273 Angiosperm View MSA
122311184 5265 Fabidae View MSA
124050431 5270 Rosid View MSA
123739086 5271 Pentapetalae View MSA
122787069 5272 Eudicot View MSA
121298624 5274 Embryophyte View MSA
123336584 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0576356 0.0 0.285642 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.25809 0.0 4.69651   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.299079 0.0 1.25711 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0308364 0.0 0.164941 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain