Gene : Phvul.010G052500 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  507
Name:  ? Phvul.010G052500 Secondary Identifier:  ? PAC:37143826
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G052500 0.5kb upstream 0.5kb upstream 1886 true Chr10: 8116696-8118581 Phaseolus vulgaris
Phvul.010G052500 0.5kb upstream 0.5kb upstream 500 false Chr10: 8116696-8117195 Phaseolus vulgaris
Phvul.010G052500 0.5kb downstream 0.5kb downstream 1886 true Chr10: 8117196-8119081 Phaseolus vulgaris
Phvul.010G052500 0.5kb downstream 0.5kb downstream 500 false Chr10: 8118582-8119081 Phaseolus vulgaris
Phvul.010G052500 1.0kb upstream 1.0kb upstream 2386 true Chr10: 8116196-8118581 Phaseolus vulgaris
Phvul.010G052500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8116196-8117195 Phaseolus vulgaris
Phvul.010G052500 1.0kb downstream 1.0kb downstream 2386 true Chr10: 8117196-8119581 Phaseolus vulgaris
Phvul.010G052500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8118582-8119581 Phaseolus vulgaris
Phvul.010G052500 2.0kb upstream 2.0kb upstream 3386 true Chr10: 8115196-8118581 Phaseolus vulgaris
Phvul.010G052500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8115196-8117195 Phaseolus vulgaris
Phvul.010G052500 2.0kb downstream 2.0kb downstream 3386 true Chr10: 8117196-8120581 Phaseolus vulgaris
Phvul.010G052500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8118582-8120581 Phaseolus vulgaris
Phvul.010G052500 5.0kb upstream 5.0kb upstream 6386 true Chr10: 8112196-8118581 Phaseolus vulgaris
Phvul.010G052500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8112196-8117195 Phaseolus vulgaris
Phvul.010G052500 5.0kb downstream 5.0kb downstream 6386 true Chr10: 8117196-8123581 Phaseolus vulgaris
Phvul.010G052500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8118582-8123581 Phaseolus vulgaris
Phvul.010G052500 10.0kb upstream 10.0kb upstream 11386 true Chr10: 8107196-8118581 Phaseolus vulgaris
Phvul.010G052500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8107196-8117195 Phaseolus vulgaris
Phvul.010G052500 10.0kb downstream 10.0kb downstream 11386 true Chr10: 8117196-8128581 Phaseolus vulgaris
Phvul.010G052500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8118582-8128581 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.93687 0.0 6.51462    
cufflinks 7.14669 0.0 20.6827   High
cufflinks 0.290668 0.0 1.15364 Low Low
cufflinks 1.73872 0.0 5.96075    
cufflinks 2.1017 0.0 7.05707    
cufflinks 3.42244 0.0 10.7703    
cufflinks 7.18095 0.0 20.8202   High
cufflinks 9.51591 0.0 26.6721   High
cufflinks 2.67053 0.0 8.66606    
cufflinks 1.88081 0.0 6.35162    
cufflinks 1.92999 0.0 6.53327    

0 Strain