Gene : Phvul.010G052300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR33399:SF3 - OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC-RELATED Genomic Order:  505
Name:  ? Phvul.010G052300 Secondary Identifier:  ? PAC:37142419
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G052300 0.5kb upstream 0.5kb upstream 3473 true Chr10: 8104775-8108247 Phaseolus vulgaris
Phvul.010G052300 0.5kb upstream 0.5kb upstream 500 false Chr10: 8104775-8105274 Phaseolus vulgaris
Phvul.010G052300 0.5kb downstream 0.5kb downstream 3473 true Chr10: 8105275-8108747 Phaseolus vulgaris
Phvul.010G052300 0.5kb downstream 0.5kb downstream 500 false Chr10: 8108248-8108747 Phaseolus vulgaris
Phvul.010G052300 1.0kb upstream 1.0kb upstream 3973 true Chr10: 8104275-8108247 Phaseolus vulgaris
Phvul.010G052300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8104275-8105274 Phaseolus vulgaris
Phvul.010G052300 1.0kb downstream 1.0kb downstream 3973 true Chr10: 8105275-8109247 Phaseolus vulgaris
Phvul.010G052300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8108248-8109247 Phaseolus vulgaris
Phvul.010G052300 2.0kb upstream 2.0kb upstream 4973 true Chr10: 8103275-8108247 Phaseolus vulgaris
Phvul.010G052300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8103275-8105274 Phaseolus vulgaris
Phvul.010G052300 2.0kb downstream 2.0kb downstream 4973 true Chr10: 8105275-8110247 Phaseolus vulgaris
Phvul.010G052300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8108248-8110247 Phaseolus vulgaris
Phvul.010G052300 5.0kb upstream 5.0kb upstream 7973 true Chr10: 8100275-8108247 Phaseolus vulgaris
Phvul.010G052300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8100275-8105274 Phaseolus vulgaris
Phvul.010G052300 5.0kb downstream 5.0kb downstream 7973 true Chr10: 8105275-8113247 Phaseolus vulgaris
Phvul.010G052300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8108248-8113247 Phaseolus vulgaris
Phvul.010G052300 10.0kb upstream 10.0kb upstream 12973 true Chr10: 8095275-8108247 Phaseolus vulgaris
Phvul.010G052300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8095275-8105274 Phaseolus vulgaris
Phvul.010G052300 10.0kb downstream 10.0kb downstream 12973 true Chr10: 8105275-8118247 Phaseolus vulgaris
Phvul.010G052300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8108248-8118247 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306013 5265 Fabidae View MSA
124068035 5270 Rosid View MSA
123737093 5271 Pentapetalae View MSA
122790173 5272 Eudicot View MSA
122043772 5273 Angiosperm View MSA
121344186 5274 Embryophyte View MSA
123427004 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 145.083 0.0 396.981 High  
cufflinks 412.622 0.0 1308.71 High  
cufflinks 4468.54 0.0 26507.5 High High
cufflinks 151.941 0.0 419.929 High  
cufflinks 336.3 0.0 1017.9 High  
cufflinks 936.832 0.0 3561.17 High  
cufflinks 1.65541 0.0 5.71874   Low
cufflinks 1.75336 0.0 6.02496   Low
cufflinks 2.8565 0.0 9.2415   Low
cufflinks 314.122 0.0 946.339 High  
cufflinks 208.971 0.0 595.82 High  

0 Strain