Gene : Phvul.010G053000 P. vulgaris v2.1
Defline:  (1 of 36) PF03140 - Plant protein of unknown function (DUF247) Genomic Order:  512
Name:  ? Phvul.010G053000 Secondary Identifier:  ? PAC:37143205
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G053000 0.5kb upstream 0.5kb upstream 1835 true Chr10: 8164615-8166449 Phaseolus vulgaris
Phvul.010G053000 0.5kb upstream 0.5kb upstream 500 false Chr10: 8164615-8165114 Phaseolus vulgaris
Phvul.010G053000 0.5kb downstream 0.5kb downstream 1835 true Chr10: 8165115-8166949 Phaseolus vulgaris
Phvul.010G053000 0.5kb downstream 0.5kb downstream 500 false Chr10: 8166450-8166949 Phaseolus vulgaris
Phvul.010G053000 1.0kb upstream 1.0kb upstream 2335 true Chr10: 8164115-8166449 Phaseolus vulgaris
Phvul.010G053000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 8164115-8165114 Phaseolus vulgaris
Phvul.010G053000 1.0kb downstream 1.0kb downstream 2335 true Chr10: 8165115-8167449 Phaseolus vulgaris
Phvul.010G053000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 8166450-8167449 Phaseolus vulgaris
Phvul.010G053000 2.0kb upstream 2.0kb upstream 3335 true Chr10: 8163115-8166449 Phaseolus vulgaris
Phvul.010G053000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 8163115-8165114 Phaseolus vulgaris
Phvul.010G053000 2.0kb downstream 2.0kb downstream 3335 true Chr10: 8165115-8168449 Phaseolus vulgaris
Phvul.010G053000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 8166450-8168449 Phaseolus vulgaris
Phvul.010G053000 5.0kb upstream 5.0kb upstream 6335 true Chr10: 8160115-8166449 Phaseolus vulgaris
Phvul.010G053000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 8160115-8165114 Phaseolus vulgaris
Phvul.010G053000 5.0kb downstream 5.0kb downstream 6335 true Chr10: 8165115-8171449 Phaseolus vulgaris
Phvul.010G053000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 8166450-8171449 Phaseolus vulgaris
Phvul.010G053000 10.0kb upstream 10.0kb upstream 11335 true Chr10: 8155115-8166449 Phaseolus vulgaris
Phvul.010G053000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 8155115-8165114 Phaseolus vulgaris
Phvul.010G053000 10.0kb downstream 10.0kb downstream 11335 true Chr10: 8165115-8176449 Phaseolus vulgaris
Phvul.010G053000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 8166450-8176449 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314572 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.874859 0.0 3.17715    
cufflinks 1.85148 0.0 6.22411    
cufflinks 3.22723 0.0 10.113    
cufflinks 1.15431 0.0 4.10871    
cufflinks 1.92675 0.0 6.50756    
cufflinks 5.19973 0.0 15.4934   High
cufflinks 0.0631491 0.0 0.287517 Low Low
cufflinks 0.11069 0.0 0.47449 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.25539 0.0 4.41791    
cufflinks 3.0125 0.0 9.65617    

0 Strain