Gene : Phvul.006G012200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10766:SF44 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  113
Name:  ? Phvul.006G012200 Secondary Identifier:  ? PAC:37171708
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G012200 0.5kb upstream 0.5kb upstream 3509 true Chr06: 6007902-6011410 Phaseolus vulgaris
Phvul.006G012200 0.5kb upstream 0.5kb upstream 500 false Chr06: 6010911-6011410 Phaseolus vulgaris
Phvul.006G012200 0.5kb downstream 0.5kb downstream 3509 true Chr06: 6007402-6010910 Phaseolus vulgaris
Phvul.006G012200 0.5kb downstream 0.5kb downstream 500 false Chr06: 6007402-6007901 Phaseolus vulgaris
Phvul.006G012200 1.0kb upstream 1.0kb upstream 4009 true Chr06: 6007902-6011910 Phaseolus vulgaris
Phvul.006G012200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 6010911-6011910 Phaseolus vulgaris
Phvul.006G012200 1.0kb downstream 1.0kb downstream 4009 true Chr06: 6006902-6010910 Phaseolus vulgaris
Phvul.006G012200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 6006902-6007901 Phaseolus vulgaris
Phvul.006G012200 2.0kb upstream 2.0kb upstream 5009 true Chr06: 6007902-6012910 Phaseolus vulgaris
Phvul.006G012200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 6010911-6012910 Phaseolus vulgaris
Phvul.006G012200 2.0kb downstream 2.0kb downstream 5009 true Chr06: 6005902-6010910 Phaseolus vulgaris
Phvul.006G012200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 6005902-6007901 Phaseolus vulgaris
Phvul.006G012200 5.0kb upstream 5.0kb upstream 8009 true Chr06: 6007902-6015910 Phaseolus vulgaris
Phvul.006G012200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 6010911-6015910 Phaseolus vulgaris
Phvul.006G012200 5.0kb downstream 5.0kb downstream 8009 true Chr06: 6002902-6010910 Phaseolus vulgaris
Phvul.006G012200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 6002902-6007901 Phaseolus vulgaris
Phvul.006G012200 10.0kb upstream 10.0kb upstream 13009 true Chr06: 6007902-6020910 Phaseolus vulgaris
Phvul.006G012200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 6010911-6020910 Phaseolus vulgaris
Phvul.006G012200 10.0kb downstream 10.0kb downstream 13009 true Chr06: 5997902-6010910 Phaseolus vulgaris
Phvul.006G012200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 5997902-6007901 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309439 5265 Fabidae View MSA
124062791 5270 Rosid View MSA
123741682 5271 Pentapetalae View MSA
122787007 5272 Eudicot View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.6836 0.0 105.282 High  
cufflinks 39.847 0.0 105.461 High  
cufflinks 45.9134 0.0 123.164 High  
cufflinks 55.6275 0.0 150.284 High High
cufflinks 33.1198 0.0 86.6581 High Low
cufflinks 50.4506 0.0 136.059 High High
cufflinks 31.4085 0.0 81.9666 High Low
cufflinks 30.5851 0.0 79.8557 High Low
cufflinks 43.4282 0.0 115.135 High  
cufflinks 42.0248 0.0 111.698 High  
cufflinks 42.4813 0.0 112.669 High  

0 Strain