Gene : Phvul.006G124000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31585:SF2 - FOLATE-BIOPTERIN TRANSPORTER 7-RELATED Genomic Order:  1234
Name:  ? Phvul.006G124000 Secondary Identifier:  ? PAC:37172514
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G124000 0.5kb upstream 0.5kb upstream 4796 true Chr06: 23226968-23231763 Phaseolus vulgaris
Phvul.006G124000 0.5kb upstream 0.5kb upstream 500 false Chr06: 23231264-23231763 Phaseolus vulgaris
Phvul.006G124000 0.5kb downstream 0.5kb downstream 4796 true Chr06: 23226468-23231263 Phaseolus vulgaris
Phvul.006G124000 0.5kb downstream 0.5kb downstream 500 false Chr06: 23226468-23226967 Phaseolus vulgaris
Phvul.006G124000 1.0kb upstream 1.0kb upstream 5296 true Chr06: 23226968-23232263 Phaseolus vulgaris
Phvul.006G124000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23231264-23232263 Phaseolus vulgaris
Phvul.006G124000 1.0kb downstream 1.0kb downstream 5296 true Chr06: 23225968-23231263 Phaseolus vulgaris
Phvul.006G124000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23225968-23226967 Phaseolus vulgaris
Phvul.006G124000 2.0kb upstream 2.0kb upstream 6296 true Chr06: 23226968-23233263 Phaseolus vulgaris
Phvul.006G124000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23231264-23233263 Phaseolus vulgaris
Phvul.006G124000 2.0kb downstream 2.0kb downstream 6296 true Chr06: 23224968-23231263 Phaseolus vulgaris
Phvul.006G124000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23224968-23226967 Phaseolus vulgaris
Phvul.006G124000 5.0kb upstream 5.0kb upstream 9296 true Chr06: 23226968-23236263 Phaseolus vulgaris
Phvul.006G124000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23231264-23236263 Phaseolus vulgaris
Phvul.006G124000 5.0kb downstream 5.0kb downstream 9296 true Chr06: 23221968-23231263 Phaseolus vulgaris
Phvul.006G124000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23221968-23226967 Phaseolus vulgaris
Phvul.006G124000 10.0kb upstream 10.0kb upstream 14296 true Chr06: 23226968-23241263 Phaseolus vulgaris
Phvul.006G124000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23231264-23241263 Phaseolus vulgaris
Phvul.006G124000 10.0kb downstream 10.0kb downstream 14296 true Chr06: 23216968-23231263 Phaseolus vulgaris
Phvul.006G124000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23216968-23226967 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305946 5265 Fabidae View MSA
124061037 5270 Rosid View MSA
123738468 5271 Pentapetalae View MSA
122786741 5272 Eudicot View MSA
122049855 5273 Angiosperm View MSA
121350266 5274 Embryophyte View MSA
123425895 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.13372 0.0 12.4173    
cufflinks 3.2836 0.0 10.1163    
cufflinks 1.96575 0.0 6.41117   Low
cufflinks 6.35796 0.0 18.2473   High
cufflinks 2.56692 0.0 8.15622    
cufflinks 2.41626 0.0 7.713    
cufflinks 2.4924 0.0 7.93124    
cufflinks 1.55077 0.0 5.1836   Low
cufflinks 2.77055 0.0 8.74311    
cufflinks 4.29446 0.0 12.804    
cufflinks 2.80207 0.0 8.82678    

0 Strain