Gene : Phvul.006G124100 P. vulgaris v2.1
Defline:  (1 of 7) K02935 - large subunit ribosomal protein L7/L12 (RP-L7, MRPL12, rplL) Genomic Order:  1235
Name:  ? Phvul.006G124100 Secondary Identifier:  ? PAC:37173534
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G124100 0.5kb upstream 0.5kb upstream 2639 true Chr06: 23232706-23235344 Phaseolus vulgaris
Phvul.006G124100 0.5kb upstream 0.5kb upstream 500 false Chr06: 23234845-23235344 Phaseolus vulgaris
Phvul.006G124100 0.5kb downstream 0.5kb downstream 2639 true Chr06: 23232206-23234844 Phaseolus vulgaris
Phvul.006G124100 0.5kb downstream 0.5kb downstream 500 false Chr06: 23232206-23232705 Phaseolus vulgaris
Phvul.006G124100 1.0kb upstream 1.0kb upstream 3139 true Chr06: 23232706-23235844 Phaseolus vulgaris
Phvul.006G124100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23234845-23235844 Phaseolus vulgaris
Phvul.006G124100 1.0kb downstream 1.0kb downstream 3139 true Chr06: 23231706-23234844 Phaseolus vulgaris
Phvul.006G124100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23231706-23232705 Phaseolus vulgaris
Phvul.006G124100 2.0kb upstream 2.0kb upstream 4139 true Chr06: 23232706-23236844 Phaseolus vulgaris
Phvul.006G124100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23234845-23236844 Phaseolus vulgaris
Phvul.006G124100 2.0kb downstream 2.0kb downstream 4139 true Chr06: 23230706-23234844 Phaseolus vulgaris
Phvul.006G124100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23230706-23232705 Phaseolus vulgaris
Phvul.006G124100 5.0kb upstream 5.0kb upstream 7139 true Chr06: 23232706-23239844 Phaseolus vulgaris
Phvul.006G124100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23234845-23239844 Phaseolus vulgaris
Phvul.006G124100 5.0kb downstream 5.0kb downstream 7139 true Chr06: 23227706-23234844 Phaseolus vulgaris
Phvul.006G124100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23227706-23232705 Phaseolus vulgaris
Phvul.006G124100 10.0kb upstream 10.0kb upstream 12139 true Chr06: 23232706-23244844 Phaseolus vulgaris
Phvul.006G124100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23234845-23244844 Phaseolus vulgaris
Phvul.006G124100 10.0kb downstream 10.0kb downstream 12139 true Chr06: 23222706-23234844 Phaseolus vulgaris
Phvul.006G124100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23222706-23232705 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304485 5265 Fabidae View MSA
124065088 5270 Rosid View MSA
123737507 5271 Pentapetalae View MSA
122792305 5272 Eudicot View MSA
122044886 5273 Angiosperm View MSA
121348936 5274 Embryophyte View MSA
123427211 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.3161 0.0 36.5944    
cufflinks 18.0973 0.0 48.635   High
cufflinks 10.347 0.0 29.0549    
cufflinks 18.6042 0.0 50.1933   High
cufflinks 9.14638 0.0 26.2803    
cufflinks 10.4123 0.0 29.296    
cufflinks 8.37072 0.0 24.0416   Low
cufflinks 12.6508 0.0 34.7475    
cufflinks 11.4512 0.0 32.0286    
cufflinks 9.89137 0.0 28.0572    
cufflinks 11.8188 0.0 33.0808    

0 Strain