Gene : Phvul.006G128000 P. vulgaris v2.1
Genomic Order:  1274 Name:  ? Phvul.006G128000
Secondary Identifier:  ? PAC:37172559
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G128000 0.5kb upstream 0.5kb upstream 8284 true Chr06: 23581195-23589478 Phaseolus vulgaris
Phvul.006G128000 0.5kb upstream 0.5kb upstream 500 false Chr06: 23588979-23589478 Phaseolus vulgaris
Phvul.006G128000 0.5kb downstream 0.5kb downstream 8284 true Chr06: 23580695-23588978 Phaseolus vulgaris
Phvul.006G128000 0.5kb downstream 0.5kb downstream 500 false Chr06: 23580695-23581194 Phaseolus vulgaris
Phvul.006G128000 1.0kb upstream 1.0kb upstream 8784 true Chr06: 23581195-23589978 Phaseolus vulgaris
Phvul.006G128000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 23588979-23589978 Phaseolus vulgaris
Phvul.006G128000 1.0kb downstream 1.0kb downstream 8784 true Chr06: 23580195-23588978 Phaseolus vulgaris
Phvul.006G128000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 23580195-23581194 Phaseolus vulgaris
Phvul.006G128000 2.0kb upstream 2.0kb upstream 9784 true Chr06: 23581195-23590978 Phaseolus vulgaris
Phvul.006G128000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 23588979-23590978 Phaseolus vulgaris
Phvul.006G128000 2.0kb downstream 2.0kb downstream 9784 true Chr06: 23579195-23588978 Phaseolus vulgaris
Phvul.006G128000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 23579195-23581194 Phaseolus vulgaris
Phvul.006G128000 5.0kb upstream 5.0kb upstream 12784 true Chr06: 23581195-23593978 Phaseolus vulgaris
Phvul.006G128000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 23588979-23593978 Phaseolus vulgaris
Phvul.006G128000 5.0kb downstream 5.0kb downstream 12784 true Chr06: 23576195-23588978 Phaseolus vulgaris
Phvul.006G128000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 23576195-23581194 Phaseolus vulgaris
Phvul.006G128000 10.0kb upstream 10.0kb upstream 17784 true Chr06: 23581195-23598978 Phaseolus vulgaris
Phvul.006G128000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 23588979-23598978 Phaseolus vulgaris
Phvul.006G128000 10.0kb downstream 10.0kb downstream 17784 true Chr06: 23571195-23588978 Phaseolus vulgaris
Phvul.006G128000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 23571195-23581194 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041414 5273 Angiosperm View MSA
122303670 5265 Fabidae View MSA
124062664 5270 Rosid View MSA
123741176 5271 Pentapetalae View MSA
122787529 5272 Eudicot View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.921501 0.0 2.93786   Low
cufflinks 2.57329 0.0 7.34488    
cufflinks 4.62732 0.0 12.4793    
cufflinks 0.923952 0.0 2.99527   Low
cufflinks 2.86665 0.0 8.16566    
cufflinks 4.66049 0.0 12.5961    
cufflinks 4.94275 0.0 13.3113    
cufflinks 3.09804 0.0 8.62849    
cufflinks 6.14425 0.0 16.3168   High
cufflinks 2.26399 0.0 6.55595    
cufflinks 2.01709 0.0 5.95264    

0 Strain