Gene : Phvul.009G021600 P. vulgaris v2.1
Defline:  (1 of 1) PTHR21450:SF19 - F5M15.15 Genomic Order:  214
Name:  ? Phvul.009G021600 Secondary Identifier:  ? PAC:37149343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G021600 0.5kb upstream 0.5kb upstream 3928 true Chr09: 4867035-4870962 Phaseolus vulgaris
Phvul.009G021600 0.5kb upstream 0.5kb upstream 500 false Chr09: 4870463-4870962 Phaseolus vulgaris
Phvul.009G021600 0.5kb downstream 0.5kb downstream 3928 true Chr09: 4866535-4870462 Phaseolus vulgaris
Phvul.009G021600 0.5kb downstream 0.5kb downstream 500 false Chr09: 4866535-4867034 Phaseolus vulgaris
Phvul.009G021600 1.0kb upstream 1.0kb upstream 4428 true Chr09: 4867035-4871462 Phaseolus vulgaris
Phvul.009G021600 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4870463-4871462 Phaseolus vulgaris
Phvul.009G021600 1.0kb downstream 1.0kb downstream 4428 true Chr09: 4866035-4870462 Phaseolus vulgaris
Phvul.009G021600 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4866035-4867034 Phaseolus vulgaris
Phvul.009G021600 2.0kb upstream 2.0kb upstream 5428 true Chr09: 4867035-4872462 Phaseolus vulgaris
Phvul.009G021600 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4870463-4872462 Phaseolus vulgaris
Phvul.009G021600 2.0kb downstream 2.0kb downstream 5428 true Chr09: 4865035-4870462 Phaseolus vulgaris
Phvul.009G021600 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4865035-4867034 Phaseolus vulgaris
Phvul.009G021600 5.0kb upstream 5.0kb upstream 8428 true Chr09: 4867035-4875462 Phaseolus vulgaris
Phvul.009G021600 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4870463-4875462 Phaseolus vulgaris
Phvul.009G021600 5.0kb downstream 5.0kb downstream 8428 true Chr09: 4862035-4870462 Phaseolus vulgaris
Phvul.009G021600 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4862035-4867034 Phaseolus vulgaris
Phvul.009G021600 10.0kb upstream 10.0kb upstream 13428 true Chr09: 4867035-4880462 Phaseolus vulgaris
Phvul.009G021600 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4870463-4880462 Phaseolus vulgaris
Phvul.009G021600 10.0kb downstream 10.0kb downstream 13428 true Chr09: 4857035-4870462 Phaseolus vulgaris
Phvul.009G021600 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4857035-4867034 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310140 5265 Fabidae View MSA
124072264 5270 Rosid View MSA
123745447 5271 Pentapetalae View MSA
122790852 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.23184 0.0 6.63666    
cufflinks 13.6489 0.0 35.3386    
cufflinks 5.09982 0.0 14.0151    
cufflinks 2.8272 0.0 8.24514    
cufflinks 8.25069 0.0 21.8822    
cufflinks 11.2257 0.0 29.2155    
cufflinks 7.69337 0.0 20.363    
cufflinks 16.4635 0.0 42.558   High
cufflinks 4.34413 0.0 12.0669    
cufflinks 0.350523 0.0 1.28044   Low
cufflinks 12.4526 0.0 32.3059    

0 Strain