Gene : Phvul.L001750 P. vulgaris v2.1
Defline:  (1 of 5) PTHR27001:SF100 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  2
Name:  ? Phvul.L001750 Secondary Identifier:  ? PAC:37152182
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001750 0.5kb upstream 0.5kb upstream 3471 true scaffold_20: 268902-272372 Phaseolus vulgaris
Phvul.L001750 0.5kb upstream 0.5kb upstream 500 false scaffold_20: 268902-269401 Phaseolus vulgaris
Phvul.L001750 0.5kb downstream 0.5kb downstream 3471 true scaffold_20: 269402-272872 Phaseolus vulgaris
Phvul.L001750 0.5kb downstream 0.5kb downstream 500 false scaffold_20: 272373-272872 Phaseolus vulgaris
Phvul.L001750 1.0kb upstream 1.0kb upstream 3971 true scaffold_20: 268402-272372 Phaseolus vulgaris
Phvul.L001750 1.0kb upstream 1.0kb upstream 1000 false scaffold_20: 268402-269401 Phaseolus vulgaris
Phvul.L001750 1.0kb downstream 1.0kb downstream 3971 true scaffold_20: 269402-273372 Phaseolus vulgaris
Phvul.L001750 1.0kb downstream 1.0kb downstream 1000 false scaffold_20: 272373-273372 Phaseolus vulgaris
Phvul.L001750 2.0kb upstream 2.0kb upstream 4971 true scaffold_20: 267402-272372 Phaseolus vulgaris
Phvul.L001750 2.0kb upstream 2.0kb upstream 2000 false scaffold_20: 267402-269401 Phaseolus vulgaris
Phvul.L001750 2.0kb downstream 2.0kb downstream 4971 true scaffold_20: 269402-274372 Phaseolus vulgaris
Phvul.L001750 2.0kb downstream 2.0kb downstream 2000 false scaffold_20: 272373-274372 Phaseolus vulgaris
Phvul.L001750 5.0kb upstream 5.0kb upstream 7971 true scaffold_20: 264402-272372 Phaseolus vulgaris
Phvul.L001750 5.0kb upstream 5.0kb upstream 5000 false scaffold_20: 264402-269401 Phaseolus vulgaris
Phvul.L001750 5.0kb downstream 5.0kb downstream 7971 true scaffold_20: 269402-277372 Phaseolus vulgaris
Phvul.L001750 5.0kb downstream 5.0kb downstream 5000 false scaffold_20: 272373-277372 Phaseolus vulgaris
Phvul.L001750 10.0kb upstream 10.0kb upstream 12971 true scaffold_20: 259402-272372 Phaseolus vulgaris
Phvul.L001750 10.0kb upstream 10.0kb upstream 10000 false scaffold_20: 259402-269401 Phaseolus vulgaris
Phvul.L001750 10.0kb downstream 10.0kb downstream 12971 true scaffold_20: 269402-282372 Phaseolus vulgaris
Phvul.L001750 10.0kb downstream 10.0kb downstream 10000 false scaffold_20: 272373-282372 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029673 5273 Angiosperm View MSA
122309563 5265 Fabidae View MSA
124072230 5270 Rosid View MSA
123746804 5271 Pentapetalae View MSA
122772037 5272 Eudicot View MSA
121298975 5274 Embryophyte View MSA
123336907 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.5802 0.0 58.5582   High
cufflinks 0.0117972 0.0 0.0589227 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 15.6769 0.0 40.563   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0134132 0.0 0.0656914 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0132636 0.0 0.0654693 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain