Gene : Phvul.L002059 P. vulgaris v2.1
Defline:  (1 of 1) K16253 - DNA-directed RNA polymerase IV and V subunit 7 (NRPD7, NRPE7) Genomic Order:  5
Name:  ? Phvul.L002059 Secondary Identifier:  ? PAC:37152170
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L002059 0.5kb upstream 0.5kb upstream 2500 true scaffold_28: 203103-205602 Phaseolus vulgaris
Phvul.L002059 0.5kb upstream 0.5kb upstream 500 false scaffold_28: 205103-205602 Phaseolus vulgaris
Phvul.L002059 0.5kb downstream 0.5kb downstream 2500 true scaffold_28: 202603-205102 Phaseolus vulgaris
Phvul.L002059 0.5kb downstream 0.5kb downstream 500 false scaffold_28: 202603-203102 Phaseolus vulgaris
Phvul.L002059 1.0kb upstream 1.0kb upstream 3000 true scaffold_28: 203103-206102 Phaseolus vulgaris
Phvul.L002059 1.0kb upstream 1.0kb upstream 1000 false scaffold_28: 205103-206102 Phaseolus vulgaris
Phvul.L002059 1.0kb downstream 1.0kb downstream 3000 true scaffold_28: 202103-205102 Phaseolus vulgaris
Phvul.L002059 1.0kb downstream 1.0kb downstream 1000 false scaffold_28: 202103-203102 Phaseolus vulgaris
Phvul.L002059 2.0kb upstream 2.0kb upstream 4000 true scaffold_28: 203103-207102 Phaseolus vulgaris
Phvul.L002059 2.0kb upstream 2.0kb upstream 2000 false scaffold_28: 205103-207102 Phaseolus vulgaris
Phvul.L002059 2.0kb downstream 2.0kb downstream 4000 true scaffold_28: 201103-205102 Phaseolus vulgaris
Phvul.L002059 2.0kb downstream 2.0kb downstream 2000 false scaffold_28: 201103-203102 Phaseolus vulgaris
Phvul.L002059 5.0kb upstream 5.0kb upstream 7000 true scaffold_28: 203103-210102 Phaseolus vulgaris
Phvul.L002059 5.0kb upstream 5.0kb upstream 5000 false scaffold_28: 205103-210102 Phaseolus vulgaris
Phvul.L002059 5.0kb downstream 5.0kb downstream 7000 true scaffold_28: 198103-205102 Phaseolus vulgaris
Phvul.L002059 5.0kb downstream 5.0kb downstream 5000 false scaffold_28: 198103-203102 Phaseolus vulgaris
Phvul.L002059 10.0kb upstream 10.0kb upstream 12000 true scaffold_28: 203103-215102 Phaseolus vulgaris
Phvul.L002059 10.0kb upstream 10.0kb upstream 10000 false scaffold_28: 205103-215102 Phaseolus vulgaris
Phvul.L002059 10.0kb downstream 10.0kb downstream 12000 true scaffold_28: 193103-205102 Phaseolus vulgaris
Phvul.L002059 10.0kb downstream 10.0kb downstream 10000 false scaffold_28: 193103-203102 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306954 5265 Fabidae View MSA
124061430 5270 Rosid View MSA
123744822 5271 Pentapetalae View MSA
122793544 5272 Eudicot View MSA
122044713 5273 Angiosperm View MSA
121351673 5274 Embryophyte View MSA
123382271 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.0423 0.0 49.8979   High
cufflinks 12.2223 0.0 35.2165    
cufflinks 5.93798 0.0 18.4619   Low
cufflinks 12.1751 0.0 35.2657    
cufflinks 6.61466 0.0 20.6544   Low
cufflinks 8.40567 0.0 25.2313    
cufflinks 7.79926 0.0 23.6497    
cufflinks 11.2226 0.0 32.4602    
cufflinks 7.23349 0.0 22.1838    
cufflinks 12.1163 0.0 35.0458    
cufflinks 11.362 0.0 33.1838    

0 Strain