Gene : Phvul.006G110100 P. vulgaris v2.1
Defline:  (1 of 8) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5) Genomic Order:  1091
Name:  ? Phvul.006G110100 Secondary Identifier:  ? PAC:37173593
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7511 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G110100 0.5kb upstream 0.5kb upstream 4431 true Chr06: 21910528-21914958 Phaseolus vulgaris
Phvul.006G110100 0.5kb upstream 0.5kb upstream 500 false Chr06: 21910528-21911027 Phaseolus vulgaris
Phvul.006G110100 0.5kb downstream 0.5kb downstream 4431 true Chr06: 21911028-21915458 Phaseolus vulgaris
Phvul.006G110100 0.5kb downstream 0.5kb downstream 500 false Chr06: 21914959-21915458 Phaseolus vulgaris
Phvul.006G110100 1.0kb upstream 1.0kb upstream 4931 true Chr06: 21910028-21914958 Phaseolus vulgaris
Phvul.006G110100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21910028-21911027 Phaseolus vulgaris
Phvul.006G110100 1.0kb downstream 1.0kb downstream 4931 true Chr06: 21911028-21915958 Phaseolus vulgaris
Phvul.006G110100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21914959-21915958 Phaseolus vulgaris
Phvul.006G110100 2.0kb upstream 2.0kb upstream 5931 true Chr06: 21909028-21914958 Phaseolus vulgaris
Phvul.006G110100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21909028-21911027 Phaseolus vulgaris
Phvul.006G110100 2.0kb downstream 2.0kb downstream 5931 true Chr06: 21911028-21916958 Phaseolus vulgaris
Phvul.006G110100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21914959-21916958 Phaseolus vulgaris
Phvul.006G110100 5.0kb upstream 5.0kb upstream 8931 true Chr06: 21906028-21914958 Phaseolus vulgaris
Phvul.006G110100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21906028-21911027 Phaseolus vulgaris
Phvul.006G110100 5.0kb downstream 5.0kb downstream 8931 true Chr06: 21911028-21919958 Phaseolus vulgaris
Phvul.006G110100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21914959-21919958 Phaseolus vulgaris
Phvul.006G110100 10.0kb upstream 10.0kb upstream 13931 true Chr06: 21901028-21914958 Phaseolus vulgaris
Phvul.006G110100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21901028-21911027 Phaseolus vulgaris
Phvul.006G110100 10.0kb downstream 10.0kb downstream 13931 true Chr06: 21911028-21924958 Phaseolus vulgaris
Phvul.006G110100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21914959-21924958 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312683 5265 Fabidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 343.798 0.0 1007.66 High High
cufflinks 217.323 0.0 599.229 High  
cufflinks 190.838 0.0 521.718 High  
cufflinks 342.135 0.0 999.742 High High
cufflinks 234.638 0.0 653.18 High  
cufflinks 172.659 0.0 466.822 High Low
cufflinks 182.088 0.0 494.179 High  
cufflinks 179.416 0.0 486.782 High Low
cufflinks 209.856 0.0 574.99 High  
cufflinks 272.067 0.0 767.177 High  
cufflinks 271.012 0.0 763.009 High  

0 Strain