Gene : Phvul.006G111300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF9 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 25-RELATED Genomic Order:  1103
Name:  ? Phvul.006G111300 Secondary Identifier:  ? PAC:37173656
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G111300 0.5kb upstream 0.5kb upstream 3820 true Chr06: 22020996-22024815 Phaseolus vulgaris
Phvul.006G111300 0.5kb upstream 0.5kb upstream 500 false Chr06: 22020996-22021495 Phaseolus vulgaris
Phvul.006G111300 0.5kb downstream 0.5kb downstream 3820 true Chr06: 22021496-22025315 Phaseolus vulgaris
Phvul.006G111300 0.5kb downstream 0.5kb downstream 500 false Chr06: 22024816-22025315 Phaseolus vulgaris
Phvul.006G111300 1.0kb upstream 1.0kb upstream 4320 true Chr06: 22020496-22024815 Phaseolus vulgaris
Phvul.006G111300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 22020496-22021495 Phaseolus vulgaris
Phvul.006G111300 1.0kb downstream 1.0kb downstream 4320 true Chr06: 22021496-22025815 Phaseolus vulgaris
Phvul.006G111300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 22024816-22025815 Phaseolus vulgaris
Phvul.006G111300 2.0kb upstream 2.0kb upstream 5320 true Chr06: 22019496-22024815 Phaseolus vulgaris
Phvul.006G111300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 22019496-22021495 Phaseolus vulgaris
Phvul.006G111300 2.0kb downstream 2.0kb downstream 5320 true Chr06: 22021496-22026815 Phaseolus vulgaris
Phvul.006G111300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 22024816-22026815 Phaseolus vulgaris
Phvul.006G111300 5.0kb upstream 5.0kb upstream 8320 true Chr06: 22016496-22024815 Phaseolus vulgaris
Phvul.006G111300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 22016496-22021495 Phaseolus vulgaris
Phvul.006G111300 5.0kb downstream 5.0kb downstream 8320 true Chr06: 22021496-22029815 Phaseolus vulgaris
Phvul.006G111300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 22024816-22029815 Phaseolus vulgaris
Phvul.006G111300 10.0kb upstream 10.0kb upstream 13320 true Chr06: 22011496-22024815 Phaseolus vulgaris
Phvul.006G111300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 22011496-22021495 Phaseolus vulgaris
Phvul.006G111300 10.0kb downstream 10.0kb downstream 13320 true Chr06: 22021496-22034815 Phaseolus vulgaris
Phvul.006G111300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 22024816-22034815 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254407 5265 Fabidae View MSA
124060800 5270 Rosid View MSA
123736639 5271 Pentapetalae View MSA
122792131 5272 Eudicot View MSA
122046585 5273 Angiosperm View MSA
121348167 5274 Embryophyte View MSA
123380754 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75112 0.0 8.4542    
cufflinks 3.96219 0.0 11.6501    
cufflinks 16.2783 0.0 42.4546   High
cufflinks 9.64408 0.0 26.1036    
cufflinks 13.5962 0.0 35.898    
cufflinks 4.36329 0.0 12.6823    
cufflinks 4.24305 0.0 12.3273    
cufflinks 4.73315 0.0 13.5824    
cufflinks 8.37773 0.0 22.8468    
cufflinks 0.86957 0.0 3.04518   Low
cufflinks 15.5277 0.0 40.6847   High

0 Strain