Gene : Phvul.010G156800 P. vulgaris v2.1
Defline:  (1 of 3) K03106 - signal recognition particle subunit SRP54 (SRP54, ffh) Genomic Order:  1580
Name:  ? Phvul.010G156800 Secondary Identifier:  ? PAC:37143996
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G156800 0.5kb upstream 0.5kb upstream 4111 true Chr10: 43534595-43538705 Phaseolus vulgaris
Phvul.010G156800 0.5kb upstream 0.5kb upstream 500 false Chr10: 43534595-43535094 Phaseolus vulgaris
Phvul.010G156800 0.5kb downstream 0.5kb downstream 4111 true Chr10: 43535095-43539205 Phaseolus vulgaris
Phvul.010G156800 0.5kb downstream 0.5kb downstream 500 false Chr10: 43538706-43539205 Phaseolus vulgaris
Phvul.010G156800 1.0kb upstream 1.0kb upstream 4611 true Chr10: 43534095-43538705 Phaseolus vulgaris
Phvul.010G156800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43534095-43535094 Phaseolus vulgaris
Phvul.010G156800 1.0kb downstream 1.0kb downstream 4611 true Chr10: 43535095-43539705 Phaseolus vulgaris
Phvul.010G156800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43538706-43539705 Phaseolus vulgaris
Phvul.010G156800 2.0kb upstream 2.0kb upstream 5611 true Chr10: 43533095-43538705 Phaseolus vulgaris
Phvul.010G156800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43533095-43535094 Phaseolus vulgaris
Phvul.010G156800 2.0kb downstream 2.0kb downstream 5611 true Chr10: 43535095-43540705 Phaseolus vulgaris
Phvul.010G156800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43538706-43540705 Phaseolus vulgaris
Phvul.010G156800 5.0kb upstream 5.0kb upstream 8611 true Chr10: 43530095-43538705 Phaseolus vulgaris
Phvul.010G156800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43530095-43535094 Phaseolus vulgaris
Phvul.010G156800 5.0kb downstream 5.0kb downstream 8611 true Chr10: 43535095-43543705 Phaseolus vulgaris
Phvul.010G156800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43538706-43543705 Phaseolus vulgaris
Phvul.010G156800 10.0kb upstream 10.0kb upstream 13611 true Chr10: 43525095-43538705 Phaseolus vulgaris
Phvul.010G156800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43525095-43535094 Phaseolus vulgaris
Phvul.010G156800 10.0kb downstream 10.0kb downstream 13611 true Chr10: 43535095-43548705 Phaseolus vulgaris
Phvul.010G156800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43538706-43548705 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308589 5265 Fabidae View MSA
124067958 5270 Rosid View MSA
123743632 5271 Pentapetalae View MSA
122786990 5272 Eudicot View MSA
122048939 5273 Angiosperm View MSA
121348760 5274 Embryophyte View MSA
123426502 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4361 0.0 34.9996    
cufflinks 12.9684 0.0 33.8358    
cufflinks 17.8766 0.0 46.2605   High
cufflinks 13.0688 0.0 34.1404    
cufflinks 12.1612 0.0 31.9153    
cufflinks 12.3879 0.0 32.3939    
cufflinks 13.0928 0.0 34.0949    
cufflinks 12.1871 0.0 31.8284    
cufflinks 13.5253 0.0 35.1826    
cufflinks 13.3094 0.0 34.6887    
cufflinks 13.8457 0.0 36.0449    

0 Strain