Gene : Phvul.010G158900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR23321:SF26 - 28S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL Genomic Order:  1600
Name:  ? Phvul.010G158900 Secondary Identifier:  ? PAC:37144141
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G158900 0.5kb upstream 0.5kb upstream 3602 true Chr10: 43795658-43799259 Phaseolus vulgaris
Phvul.010G158900 0.5kb upstream 0.5kb upstream 500 false Chr10: 43795658-43796157 Phaseolus vulgaris
Phvul.010G158900 0.5kb downstream 0.5kb downstream 3602 true Chr10: 43796158-43799759 Phaseolus vulgaris
Phvul.010G158900 0.5kb downstream 0.5kb downstream 500 false Chr10: 43799260-43799759 Phaseolus vulgaris
Phvul.010G158900 1.0kb upstream 1.0kb upstream 4102 true Chr10: 43795158-43799259 Phaseolus vulgaris
Phvul.010G158900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43795158-43796157 Phaseolus vulgaris
Phvul.010G158900 1.0kb downstream 1.0kb downstream 4102 true Chr10: 43796158-43800259 Phaseolus vulgaris
Phvul.010G158900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43799260-43800259 Phaseolus vulgaris
Phvul.010G158900 2.0kb upstream 2.0kb upstream 5102 true Chr10: 43794158-43799259 Phaseolus vulgaris
Phvul.010G158900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43794158-43796157 Phaseolus vulgaris
Phvul.010G158900 2.0kb downstream 2.0kb downstream 5102 true Chr10: 43796158-43801259 Phaseolus vulgaris
Phvul.010G158900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43799260-43801259 Phaseolus vulgaris
Phvul.010G158900 5.0kb upstream 5.0kb upstream 8102 true Chr10: 43791158-43799259 Phaseolus vulgaris
Phvul.010G158900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43791158-43796157 Phaseolus vulgaris
Phvul.010G158900 5.0kb downstream 5.0kb downstream 8102 true Chr10: 43796158-43804259 Phaseolus vulgaris
Phvul.010G158900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43799260-43804259 Phaseolus vulgaris
Phvul.010G158900 10.0kb upstream 10.0kb upstream 13102 true Chr10: 43786158-43799259 Phaseolus vulgaris
Phvul.010G158900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43786158-43796157 Phaseolus vulgaris
Phvul.010G158900 10.0kb downstream 10.0kb downstream 13102 true Chr10: 43796158-43809259 Phaseolus vulgaris
Phvul.010G158900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43799260-43809259 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303265 5265 Fabidae View MSA
124068657 5270 Rosid View MSA
123737311 5271 Pentapetalae View MSA
122790003 5272 Eudicot View MSA
122045116 5273 Angiosperm View MSA
121310400 5274 Embryophyte View MSA
123428201 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.4574 0.0 35.205   Low
cufflinks 20.6582 0.0 53.4228    
cufflinks 11.9384 0.0 31.5059   Low
cufflinks 22.7828 0.0 58.8894   High
cufflinks 21.9037 0.0 56.6209    
cufflinks 14.2716 0.0 37.267    
cufflinks 15.4075 0.0 40.0035    
cufflinks 15.6282 0.0 40.6176    
cufflinks 19.4142 0.0 50.2087    
cufflinks 20.6387 0.0 53.371    
cufflinks 23.2563 0.0 60.1201   High

0 Strain