Gene : Phvul.006G104500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22884//PTHR22884:SF376 - SET DOMAIN PROTEINS // SUBFAMILY NOT NAMED Genomic Order:  1038
Name:  ? Phvul.006G104500 Secondary Identifier:  ? PAC:37172374
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G104500 0.5kb upstream 0.5kb upstream 7073 true Chr06: 21384348-21391420 Phaseolus vulgaris
Phvul.006G104500 0.5kb upstream 0.5kb upstream 500 false Chr06: 21384348-21384847 Phaseolus vulgaris
Phvul.006G104500 0.5kb downstream 0.5kb downstream 7073 true Chr06: 21384848-21391920 Phaseolus vulgaris
Phvul.006G104500 0.5kb downstream 0.5kb downstream 500 false Chr06: 21391421-21391920 Phaseolus vulgaris
Phvul.006G104500 1.0kb upstream 1.0kb upstream 7573 true Chr06: 21383848-21391420 Phaseolus vulgaris
Phvul.006G104500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 21383848-21384847 Phaseolus vulgaris
Phvul.006G104500 1.0kb downstream 1.0kb downstream 7573 true Chr06: 21384848-21392420 Phaseolus vulgaris
Phvul.006G104500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 21391421-21392420 Phaseolus vulgaris
Phvul.006G104500 2.0kb upstream 2.0kb upstream 8573 true Chr06: 21382848-21391420 Phaseolus vulgaris
Phvul.006G104500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 21382848-21384847 Phaseolus vulgaris
Phvul.006G104500 2.0kb downstream 2.0kb downstream 8573 true Chr06: 21384848-21393420 Phaseolus vulgaris
Phvul.006G104500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 21391421-21393420 Phaseolus vulgaris
Phvul.006G104500 5.0kb upstream 5.0kb upstream 11573 true Chr06: 21379848-21391420 Phaseolus vulgaris
Phvul.006G104500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 21379848-21384847 Phaseolus vulgaris
Phvul.006G104500 5.0kb downstream 5.0kb downstream 11573 true Chr06: 21384848-21396420 Phaseolus vulgaris
Phvul.006G104500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 21391421-21396420 Phaseolus vulgaris
Phvul.006G104500 10.0kb upstream 10.0kb upstream 16573 true Chr06: 21374848-21391420 Phaseolus vulgaris
Phvul.006G104500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 21374848-21384847 Phaseolus vulgaris
Phvul.006G104500 10.0kb downstream 10.0kb downstream 16573 true Chr06: 21384848-21401420 Phaseolus vulgaris
Phvul.006G104500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 21391421-21401420 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310978 5265 Fabidae View MSA
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86456 0.0 5.81345    
cufflinks 2.36171 0.0 7.18619    
cufflinks 6.458 0.0 17.6786   High
cufflinks 1.25841 0.0 4.16363    
cufflinks 1.34905 0.0 4.41533    
cufflinks 6.67475 0.0 18.2469   High
cufflinks 1.05177 0.0 3.50694    
cufflinks 0.847662 0.0 2.87515    
cufflinks 0.946695 0.0 3.20581    
cufflinks 0.552844 0.0 1.97864   Low
cufflinks 2.70277 0.0 8.14939    

0 Strain