Gene : Phvul.006G091400 P. vulgaris v2.1
Defline:  (1 of 19) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  906
Name:  ? Phvul.006G091400 Secondary Identifier:  ? PAC:37171773
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G091400 0.5kb upstream 0.5kb upstream 6564 true Chr06: 20305143-20311706 Phaseolus vulgaris
Phvul.006G091400 0.5kb upstream 0.5kb upstream 500 false Chr06: 20311207-20311706 Phaseolus vulgaris
Phvul.006G091400 0.5kb downstream 0.5kb downstream 6564 true Chr06: 20304643-20311206 Phaseolus vulgaris
Phvul.006G091400 0.5kb downstream 0.5kb downstream 500 false Chr06: 20304643-20305142 Phaseolus vulgaris
Phvul.006G091400 1.0kb upstream 1.0kb upstream 7064 true Chr06: 20305143-20312206 Phaseolus vulgaris
Phvul.006G091400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20311207-20312206 Phaseolus vulgaris
Phvul.006G091400 1.0kb downstream 1.0kb downstream 7064 true Chr06: 20304143-20311206 Phaseolus vulgaris
Phvul.006G091400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20304143-20305142 Phaseolus vulgaris
Phvul.006G091400 2.0kb upstream 2.0kb upstream 8064 true Chr06: 20305143-20313206 Phaseolus vulgaris
Phvul.006G091400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20311207-20313206 Phaseolus vulgaris
Phvul.006G091400 2.0kb downstream 2.0kb downstream 8064 true Chr06: 20303143-20311206 Phaseolus vulgaris
Phvul.006G091400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20303143-20305142 Phaseolus vulgaris
Phvul.006G091400 5.0kb upstream 5.0kb upstream 11064 true Chr06: 20305143-20316206 Phaseolus vulgaris
Phvul.006G091400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20311207-20316206 Phaseolus vulgaris
Phvul.006G091400 5.0kb downstream 5.0kb downstream 11064 true Chr06: 20300143-20311206 Phaseolus vulgaris
Phvul.006G091400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20300143-20305142 Phaseolus vulgaris
Phvul.006G091400 10.0kb upstream 10.0kb upstream 16064 true Chr06: 20305143-20321206 Phaseolus vulgaris
Phvul.006G091400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20311207-20321206 Phaseolus vulgaris
Phvul.006G091400 10.0kb downstream 10.0kb downstream 16064 true Chr06: 20295143-20311206 Phaseolus vulgaris
Phvul.006G091400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20295143-20305142 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
122300906 5265 Fabidae View MSA
124071703 5270 Rosid View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.8859 0.0 64.941   High
cufflinks 9.23678 0.0 24.1833   High
cufflinks 0.0188016 0.0 0.0878166 Low Low
cufflinks 13.3503 0.0 34.5767   High
cufflinks 0.0606816 0.0 0.255922 Low  
cufflinks 0.0717484 0.0 0.29592 Low  
cufflinks 0.0125073 0.0 0.0612549 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.582375 0.0 2.01811    
cufflinks 0.831647 0.0 2.77651    

0 Strain