Gene : Phvul.006G091800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10992:SF773 - PROTEIN AUXIN RESPONSE 4 Genomic Order:  910
Name:  ? Phvul.006G091800 Secondary Identifier:  ? PAC:37173944
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G091800 0.5kb upstream 0.5kb upstream 3777 true Chr06: 20364200-20367976 Phaseolus vulgaris
Phvul.006G091800 0.5kb upstream 0.5kb upstream 500 false Chr06: 20364200-20364699 Phaseolus vulgaris
Phvul.006G091800 0.5kb downstream 0.5kb downstream 3777 true Chr06: 20364700-20368476 Phaseolus vulgaris
Phvul.006G091800 0.5kb downstream 0.5kb downstream 500 false Chr06: 20367977-20368476 Phaseolus vulgaris
Phvul.006G091800 1.0kb upstream 1.0kb upstream 4277 true Chr06: 20363700-20367976 Phaseolus vulgaris
Phvul.006G091800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20363700-20364699 Phaseolus vulgaris
Phvul.006G091800 1.0kb downstream 1.0kb downstream 4277 true Chr06: 20364700-20368976 Phaseolus vulgaris
Phvul.006G091800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20367977-20368976 Phaseolus vulgaris
Phvul.006G091800 2.0kb upstream 2.0kb upstream 5277 true Chr06: 20362700-20367976 Phaseolus vulgaris
Phvul.006G091800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20362700-20364699 Phaseolus vulgaris
Phvul.006G091800 2.0kb downstream 2.0kb downstream 5277 true Chr06: 20364700-20369976 Phaseolus vulgaris
Phvul.006G091800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20367977-20369976 Phaseolus vulgaris
Phvul.006G091800 5.0kb upstream 5.0kb upstream 8277 true Chr06: 20359700-20367976 Phaseolus vulgaris
Phvul.006G091800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20359700-20364699 Phaseolus vulgaris
Phvul.006G091800 5.0kb downstream 5.0kb downstream 8277 true Chr06: 20364700-20372976 Phaseolus vulgaris
Phvul.006G091800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20367977-20372976 Phaseolus vulgaris
Phvul.006G091800 10.0kb upstream 10.0kb upstream 13277 true Chr06: 20354700-20367976 Phaseolus vulgaris
Phvul.006G091800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20354700-20364699 Phaseolus vulgaris
Phvul.006G091800 10.0kb downstream 10.0kb downstream 13277 true Chr06: 20364700-20377976 Phaseolus vulgaris
Phvul.006G091800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20367977-20377976 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300656 5265 Fabidae View MSA
124064720 5270 Rosid View MSA
123737240 5271 Pentapetalae View MSA
122791841 5272 Eudicot View MSA
122047835 5273 Angiosperm View MSA
121347873 5274 Embryophyte View MSA
123380660 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3137 0.0 29.6058   Low
cufflinks 28.6365 0.0 74.5641    
cufflinks 7.24356 0.0 19.5455   Low
cufflinks 23.4042 0.0 60.5611    
cufflinks 31.5516 0.0 82.6764    
cufflinks 12.2487 0.0 31.9535    
cufflinks 18.1932 0.0 47.0263    
cufflinks 15.044 0.0 38.9776    
cufflinks 23.5358 0.0 60.9801    
cufflinks 19.514 0.0 50.4406    
cufflinks 42.89 0.0 114.667 High High

0 Strain