Gene : Phvul.010G152200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10209:SF95 - GIBBERELLIN 3-BETA-DIOXYGENASE 1-RELATED Genomic Order:  1534
Name:  ? Phvul.010G152200 Secondary Identifier:  ? PAC:37143929
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5035 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G152200 0.5kb upstream 0.5kb upstream 2794 true Chr10: 43227108-43229901 Phaseolus vulgaris
Phvul.010G152200 0.5kb upstream 0.5kb upstream 500 false Chr10: 43227108-43227607 Phaseolus vulgaris
Phvul.010G152200 0.5kb downstream 0.5kb downstream 2794 true Chr10: 43227608-43230401 Phaseolus vulgaris
Phvul.010G152200 0.5kb downstream 0.5kb downstream 500 false Chr10: 43229902-43230401 Phaseolus vulgaris
Phvul.010G152200 1.0kb upstream 1.0kb upstream 3294 true Chr10: 43226608-43229901 Phaseolus vulgaris
Phvul.010G152200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43226608-43227607 Phaseolus vulgaris
Phvul.010G152200 1.0kb downstream 1.0kb downstream 3294 true Chr10: 43227608-43230901 Phaseolus vulgaris
Phvul.010G152200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43229902-43230901 Phaseolus vulgaris
Phvul.010G152200 2.0kb upstream 2.0kb upstream 4294 true Chr10: 43225608-43229901 Phaseolus vulgaris
Phvul.010G152200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43225608-43227607 Phaseolus vulgaris
Phvul.010G152200 2.0kb downstream 2.0kb downstream 4294 true Chr10: 43227608-43231901 Phaseolus vulgaris
Phvul.010G152200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43229902-43231901 Phaseolus vulgaris
Phvul.010G152200 5.0kb upstream 5.0kb upstream 7294 true Chr10: 43222608-43229901 Phaseolus vulgaris
Phvul.010G152200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43222608-43227607 Phaseolus vulgaris
Phvul.010G152200 5.0kb downstream 5.0kb downstream 7294 true Chr10: 43227608-43234901 Phaseolus vulgaris
Phvul.010G152200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43229902-43234901 Phaseolus vulgaris
Phvul.010G152200 10.0kb upstream 10.0kb upstream 12294 true Chr10: 43217608-43229901 Phaseolus vulgaris
Phvul.010G152200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43217608-43227607 Phaseolus vulgaris
Phvul.010G152200 10.0kb downstream 10.0kb downstream 12294 true Chr10: 43227608-43239901 Phaseolus vulgaris
Phvul.010G152200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43229902-43239901 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041105 5273 Angiosperm View MSA
122310595 5265 Fabidae View MSA
124070624 5270 Rosid View MSA
123753258 5271 Pentapetalae View MSA
122793066 5272 Eudicot View MSA
121349233 5274 Embryophyte View MSA
123381227 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0507389 0.0 0.233546 Low Low
cufflinks 0.145501 0.0 0.607112 Low  
cufflinks 2.97578 0.0 9.43491    
cufflinks 0.0450712 0.0 0.209362 Low Low
cufflinks 4.35662 0.0 13.0322    
cufflinks 1.97785 0.0 6.53585    
cufflinks 2.70876 0.0 8.54326    
cufflinks 0.976827 0.0 3.47307    
cufflinks 1.39789 0.0 4.76618    
cufflinks 0.0665297 0.0 0.298335 Low Low
cufflinks 6.2995 0.0 18.144   High

0 Strain