Gene : Phvul.010G151200 P. vulgaris v2.1
Defline:  (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) Genomic Order:  1523
Name:  ? Phvul.010G151200 Secondary Identifier:  ? PAC:37142874
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G151200 0.5kb upstream 0.5kb upstream 10968 true Chr10: 43108882-43119849 Phaseolus vulgaris
Phvul.010G151200 0.5kb upstream 0.5kb upstream 500 false Chr10: 43108882-43109381 Phaseolus vulgaris
Phvul.010G151200 0.5kb downstream 0.5kb downstream 10968 true Chr10: 43109382-43120349 Phaseolus vulgaris
Phvul.010G151200 0.5kb downstream 0.5kb downstream 500 false Chr10: 43119850-43120349 Phaseolus vulgaris
Phvul.010G151200 1.0kb upstream 1.0kb upstream 11468 true Chr10: 43108382-43119849 Phaseolus vulgaris
Phvul.010G151200 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43108382-43109381 Phaseolus vulgaris
Phvul.010G151200 1.0kb downstream 1.0kb downstream 11468 true Chr10: 43109382-43120849 Phaseolus vulgaris
Phvul.010G151200 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43119850-43120849 Phaseolus vulgaris
Phvul.010G151200 2.0kb upstream 2.0kb upstream 12468 true Chr10: 43107382-43119849 Phaseolus vulgaris
Phvul.010G151200 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43107382-43109381 Phaseolus vulgaris
Phvul.010G151200 2.0kb downstream 2.0kb downstream 12468 true Chr10: 43109382-43121849 Phaseolus vulgaris
Phvul.010G151200 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43119850-43121849 Phaseolus vulgaris
Phvul.010G151200 5.0kb upstream 5.0kb upstream 15468 true Chr10: 43104382-43119849 Phaseolus vulgaris
Phvul.010G151200 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43104382-43109381 Phaseolus vulgaris
Phvul.010G151200 5.0kb downstream 5.0kb downstream 15468 true Chr10: 43109382-43124849 Phaseolus vulgaris
Phvul.010G151200 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43119850-43124849 Phaseolus vulgaris
Phvul.010G151200 10.0kb upstream 10.0kb upstream 20468 true Chr10: 43099382-43119849 Phaseolus vulgaris
Phvul.010G151200 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43099382-43109381 Phaseolus vulgaris
Phvul.010G151200 10.0kb downstream 10.0kb downstream 20468 true Chr10: 43109382-43129849 Phaseolus vulgaris
Phvul.010G151200 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43119850-43129849 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314156 5265 Fabidae View MSA
124066819 5270 Rosid View MSA
123745194 5271 Pentapetalae View MSA
122792729 5272 Eudicot View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.9967 0.0 41.5054   Low
cufflinks 36.7485 0.0 100.627 High  
cufflinks 41.9851 0.0 116.653 High  
cufflinks 27.7682 0.0 73.721    
cufflinks 37.604 0.0 102.668 High  
cufflinks 37.3056 0.0 102.305 High  
cufflinks 37.5425 0.0 102.928 High  
cufflinks 37.6122 0.0 103.5 High  
cufflinks 45.0666 0.0 125.613 High  
cufflinks 41.0656 0.0 113.627 High  
cufflinks 39.7849 0.0 109.308 High  

0 Strain