Gene : Phvul.010G153600 P. vulgaris v2.1
Defline:  (1 of 2) K14546 - U3 small nucleolar RNA-associated protein 5 (UTP5, WDR43) Genomic Order:  1548
Name:  ? Phvul.010G153600 Secondary Identifier:  ? PAC:37142949
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G153600 0.5kb upstream 0.5kb upstream 6316 true Chr10: 43337157-43343472 Phaseolus vulgaris
Phvul.010G153600 0.5kb upstream 0.5kb upstream 500 false Chr10: 43337157-43337656 Phaseolus vulgaris
Phvul.010G153600 0.5kb downstream 0.5kb downstream 6316 true Chr10: 43337657-43343972 Phaseolus vulgaris
Phvul.010G153600 0.5kb downstream 0.5kb downstream 500 false Chr10: 43343473-43343972 Phaseolus vulgaris
Phvul.010G153600 1.0kb upstream 1.0kb upstream 6816 true Chr10: 43336657-43343472 Phaseolus vulgaris
Phvul.010G153600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 43336657-43337656 Phaseolus vulgaris
Phvul.010G153600 1.0kb downstream 1.0kb downstream 6816 true Chr10: 43337657-43344472 Phaseolus vulgaris
Phvul.010G153600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 43343473-43344472 Phaseolus vulgaris
Phvul.010G153600 2.0kb upstream 2.0kb upstream 7816 true Chr10: 43335657-43343472 Phaseolus vulgaris
Phvul.010G153600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 43335657-43337656 Phaseolus vulgaris
Phvul.010G153600 2.0kb downstream 2.0kb downstream 7816 true Chr10: 43337657-43345472 Phaseolus vulgaris
Phvul.010G153600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 43343473-43345472 Phaseolus vulgaris
Phvul.010G153600 5.0kb upstream 5.0kb upstream 10816 true Chr10: 43332657-43343472 Phaseolus vulgaris
Phvul.010G153600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 43332657-43337656 Phaseolus vulgaris
Phvul.010G153600 5.0kb downstream 5.0kb downstream 10816 true Chr10: 43337657-43348472 Phaseolus vulgaris
Phvul.010G153600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 43343473-43348472 Phaseolus vulgaris
Phvul.010G153600 10.0kb upstream 10.0kb upstream 15816 true Chr10: 43327657-43343472 Phaseolus vulgaris
Phvul.010G153600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 43327657-43337656 Phaseolus vulgaris
Phvul.010G153600 10.0kb downstream 10.0kb downstream 15816 true Chr10: 43337657-43353472 Phaseolus vulgaris
Phvul.010G153600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 43343473-43353472 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297563 5265 Fabidae View MSA
124070647 5270 Rosid View MSA
123742846 5271 Pentapetalae View MSA
122770409 5272 Eudicot View MSA
122048492 5273 Angiosperm View MSA
121346834 5274 Embryophyte View MSA
123423807 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08792 0.0 11.631    
cufflinks 6.35509 0.0 17.4217    
cufflinks 3.76364 0.0 10.8004    
cufflinks 2.5813 0.0 7.81928   Low
cufflinks 3.83545 0.0 11.1468    
cufflinks 2.14887 0.0 6.58338   Low
cufflinks 6.77142 0.0 18.4742    
cufflinks 10.2343 0.0 26.9464   High
cufflinks 6.96336 0.0 18.9812    
cufflinks 5.26707 0.0 14.7077    
cufflinks 3.54 0.0 10.3491    

0 Strain