Gene : Phvul.010G139300 P. vulgaris v2.1

Defline:  (1 of 4) PTHR23421:SF74 - BETA-GALACTOSIDASE 1 Genomic Order:  1402
Name:  ? Phvul.010G139300 Secondary Identifier:  ? PAC:37142785

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G139300 0.5kb upstream 0.5kb upstream 6622 true Chr10: 42158224-42164845 Phaseolus vulgaris
Phvul.010G139300 0.5kb upstream 0.5kb upstream 500 false Chr10: 42164346-42164845 Phaseolus vulgaris
Phvul.010G139300 0.5kb downstream 0.5kb downstream 6622 true Chr10: 42157724-42164345 Phaseolus vulgaris
Phvul.010G139300 0.5kb downstream 0.5kb downstream 500 false Chr10: 42157724-42158223 Phaseolus vulgaris
Phvul.010G139300 1.0kb upstream 1.0kb upstream 7122 true Chr10: 42158224-42165345 Phaseolus vulgaris
Phvul.010G139300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42164346-42165345 Phaseolus vulgaris
Phvul.010G139300 1.0kb downstream 1.0kb downstream 7122 true Chr10: 42157224-42164345 Phaseolus vulgaris
Phvul.010G139300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42157224-42158223 Phaseolus vulgaris
Phvul.010G139300 2.0kb upstream 2.0kb upstream 8122 true Chr10: 42158224-42166345 Phaseolus vulgaris
Phvul.010G139300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42164346-42166345 Phaseolus vulgaris
Phvul.010G139300 2.0kb downstream 2.0kb downstream 8122 true Chr10: 42156224-42164345 Phaseolus vulgaris
Phvul.010G139300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42156224-42158223 Phaseolus vulgaris
Phvul.010G139300 5.0kb upstream 5.0kb upstream 11122 true Chr10: 42158224-42169345 Phaseolus vulgaris
Phvul.010G139300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42164346-42169345 Phaseolus vulgaris
Phvul.010G139300 5.0kb downstream 5.0kb downstream 11122 true Chr10: 42153224-42164345 Phaseolus vulgaris
Phvul.010G139300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42153224-42158223 Phaseolus vulgaris
Phvul.010G139300 10.0kb upstream 10.0kb upstream 16122 true Chr10: 42158224-42174345 Phaseolus vulgaris
Phvul.010G139300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42164346-42174345 Phaseolus vulgaris
Phvul.010G139300 10.0kb downstream 10.0kb downstream 16122 true Chr10: 42148224-42164345 Phaseolus vulgaris
Phvul.010G139300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42148224-42158223 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310260 5265 Fabidae View MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 853.365 0.0 4425.86 High High
cufflinks 63.2686 0.0 181.962 High  
cufflinks 12.4342 0.0 32.1414   Low
cufflinks 7.66836 0.0 20.2053   Low
cufflinks 102.254 0.0 312.895 High  
cufflinks 21.3734 0.0 55.8524    
cufflinks 40.4584 0.0 110.732 High  
cufflinks 15.3087 0.0 39.6278    
cufflinks 135.917 0.0 438.409 High  
cufflinks 67.4062 0.0 195.299 High  
cufflinks 38.6602 0.0 104.95 High  

0 Strain