Gene : Phvul.006G082800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR13439//PTHR13439:SF13 - CT120 PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  813
Name:  ? Phvul.006G082800 Secondary Identifier:  ? PAC:37173202
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G082800 0.5kb upstream 0.5kb upstream 8216 true Chr06: 19485922-19494137 Phaseolus vulgaris
Phvul.006G082800 0.5kb upstream 0.5kb upstream 500 false Chr06: 19493638-19494137 Phaseolus vulgaris
Phvul.006G082800 0.5kb downstream 0.5kb downstream 8216 true Chr06: 19485422-19493637 Phaseolus vulgaris
Phvul.006G082800 0.5kb downstream 0.5kb downstream 500 false Chr06: 19485422-19485921 Phaseolus vulgaris
Phvul.006G082800 1.0kb upstream 1.0kb upstream 8716 true Chr06: 19485922-19494637 Phaseolus vulgaris
Phvul.006G082800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19493638-19494637 Phaseolus vulgaris
Phvul.006G082800 1.0kb downstream 1.0kb downstream 8716 true Chr06: 19484922-19493637 Phaseolus vulgaris
Phvul.006G082800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19484922-19485921 Phaseolus vulgaris
Phvul.006G082800 2.0kb upstream 2.0kb upstream 9716 true Chr06: 19485922-19495637 Phaseolus vulgaris
Phvul.006G082800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19493638-19495637 Phaseolus vulgaris
Phvul.006G082800 2.0kb downstream 2.0kb downstream 9716 true Chr06: 19483922-19493637 Phaseolus vulgaris
Phvul.006G082800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19483922-19485921 Phaseolus vulgaris
Phvul.006G082800 5.0kb upstream 5.0kb upstream 12716 true Chr06: 19485922-19498637 Phaseolus vulgaris
Phvul.006G082800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19493638-19498637 Phaseolus vulgaris
Phvul.006G082800 5.0kb downstream 5.0kb downstream 12716 true Chr06: 19480922-19493637 Phaseolus vulgaris
Phvul.006G082800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19480922-19485921 Phaseolus vulgaris
Phvul.006G082800 10.0kb upstream 10.0kb upstream 17716 true Chr06: 19485922-19503637 Phaseolus vulgaris
Phvul.006G082800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19493638-19503637 Phaseolus vulgaris
Phvul.006G082800 10.0kb downstream 10.0kb downstream 17716 true Chr06: 19475922-19493637 Phaseolus vulgaris
Phvul.006G082800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19475922-19485921 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302925 5265 Fabidae View MSA
124066544 5270 Rosid View MSA
123743860 5271 Pentapetalae View MSA
122791949 5272 Eudicot View MSA
122042295 5273 Angiosperm View MSA
121347899 5274 Embryophyte View MSA
123428797 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.63924 0.0 20.7757   High
cufflinks 2.14583 0.0 7.64141   Low
cufflinks 4.93827 0.0 15.9626    
cufflinks 6.08001 0.0 19.4158   High
cufflinks 4.14722 0.0 13.8479    
cufflinks 3.09394 0.0 10.5986    
cufflinks 2.45827 0.0 8.66621    
cufflinks 2.32254 0.0 8.17401    
cufflinks 3.57109 0.0 12.1476    
cufflinks 3.28415 0.0 11.1659    
cufflinks 2.08476 0.0 7.49339   Low

0 Strain