Gene : Phvul.010G134300 P. vulgaris v2.1
Defline:  (1 of 10) PTHR10052 - 60S RIBOSOMAL PROTEIN L18A Genomic Order:  1350
Name:  ? Phvul.010G134300 Secondary Identifier:  ? PAC:37143303
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G134300 0.5kb upstream 0.5kb upstream 4261 true Chr10: 41653162-41657422 Phaseolus vulgaris
Phvul.010G134300 0.5kb upstream 0.5kb upstream 500 false Chr10: 41653162-41653661 Phaseolus vulgaris
Phvul.010G134300 0.5kb downstream 0.5kb downstream 4261 true Chr10: 41653662-41657922 Phaseolus vulgaris
Phvul.010G134300 0.5kb downstream 0.5kb downstream 500 false Chr10: 41657423-41657922 Phaseolus vulgaris
Phvul.010G134300 1.0kb upstream 1.0kb upstream 4761 true Chr10: 41652662-41657422 Phaseolus vulgaris
Phvul.010G134300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 41652662-41653661 Phaseolus vulgaris
Phvul.010G134300 1.0kb downstream 1.0kb downstream 4761 true Chr10: 41653662-41658422 Phaseolus vulgaris
Phvul.010G134300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 41657423-41658422 Phaseolus vulgaris
Phvul.010G134300 2.0kb upstream 2.0kb upstream 5761 true Chr10: 41651662-41657422 Phaseolus vulgaris
Phvul.010G134300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 41651662-41653661 Phaseolus vulgaris
Phvul.010G134300 2.0kb downstream 2.0kb downstream 5761 true Chr10: 41653662-41659422 Phaseolus vulgaris
Phvul.010G134300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 41657423-41659422 Phaseolus vulgaris
Phvul.010G134300 5.0kb upstream 5.0kb upstream 8761 true Chr10: 41648662-41657422 Phaseolus vulgaris
Phvul.010G134300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 41648662-41653661 Phaseolus vulgaris
Phvul.010G134300 5.0kb downstream 5.0kb downstream 8761 true Chr10: 41653662-41662422 Phaseolus vulgaris
Phvul.010G134300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 41657423-41662422 Phaseolus vulgaris
Phvul.010G134300 10.0kb upstream 10.0kb upstream 13761 true Chr10: 41643662-41657422 Phaseolus vulgaris
Phvul.010G134300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 41643662-41653661 Phaseolus vulgaris
Phvul.010G134300 10.0kb downstream 10.0kb downstream 13761 true Chr10: 41653662-41667422 Phaseolus vulgaris
Phvul.010G134300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 41657423-41667422 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
122307579 5265 Fabidae View MSA
124063459 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.4338 0.0 61.8603    
cufflinks 11.7386 0.0 61.027    
cufflinks 8.54997 0.0 40.0333    
cufflinks 13.9874 0.0 63.409    
cufflinks 8.97867 0.0 40.4964    
cufflinks 7.70947 0.0 37.4982    
cufflinks 7.04008 0.0 43.444    
cufflinks 6.1832 0.0 35.7712   Low
cufflinks 7.49884 0.0 37.6863    
cufflinks 37.0746 0.0 182.794 High High
cufflinks 10.4768 0.0 63.385    

0 Strain