Gene : Phvul.006G077900 P. vulgaris v2.1
Defline:  (1 of 8) PTHR11945:SF183 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL80-RELATED Genomic Order:  764
Name:  ? Phvul.006G077900 Secondary Identifier:  ? PAC:37173446
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G077900 0.5kb upstream 0.5kb upstream 1037 true Chr06: 18979955-18980991 Phaseolus vulgaris
Phvul.006G077900 0.5kb upstream 0.5kb upstream 500 false Chr06: 18980492-18980991 Phaseolus vulgaris
Phvul.006G077900 0.5kb downstream 0.5kb downstream 1037 true Chr06: 18979455-18980491 Phaseolus vulgaris
Phvul.006G077900 0.5kb downstream 0.5kb downstream 500 false Chr06: 18979455-18979954 Phaseolus vulgaris
Phvul.006G077900 1.0kb upstream 1.0kb upstream 1537 true Chr06: 18979955-18981491 Phaseolus vulgaris
Phvul.006G077900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18980492-18981491 Phaseolus vulgaris
Phvul.006G077900 1.0kb downstream 1.0kb downstream 1537 true Chr06: 18978955-18980491 Phaseolus vulgaris
Phvul.006G077900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18978955-18979954 Phaseolus vulgaris
Phvul.006G077900 2.0kb upstream 2.0kb upstream 2537 true Chr06: 18979955-18982491 Phaseolus vulgaris
Phvul.006G077900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18980492-18982491 Phaseolus vulgaris
Phvul.006G077900 2.0kb downstream 2.0kb downstream 2537 true Chr06: 18977955-18980491 Phaseolus vulgaris
Phvul.006G077900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18977955-18979954 Phaseolus vulgaris
Phvul.006G077900 5.0kb upstream 5.0kb upstream 5537 true Chr06: 18979955-18985491 Phaseolus vulgaris
Phvul.006G077900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18980492-18985491 Phaseolus vulgaris
Phvul.006G077900 5.0kb downstream 5.0kb downstream 5537 true Chr06: 18974955-18980491 Phaseolus vulgaris
Phvul.006G077900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18974955-18979954 Phaseolus vulgaris
Phvul.006G077900 10.0kb upstream 10.0kb upstream 10537 true Chr06: 18979955-18990491 Phaseolus vulgaris
Phvul.006G077900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18980492-18990491 Phaseolus vulgaris
Phvul.006G077900 10.0kb downstream 10.0kb downstream 10537 true Chr06: 18969955-18980491 Phaseolus vulgaris
Phvul.006G077900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18969955-18979954 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315745 5265 Fabidae View MSA
124074630 5270 Rosid View MSA
123753664 5271 Pentapetalae View MSA
122797561 5272 Eudicot View MSA
122050867 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.200787 0.0 0.893601 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.150908 0.0 0.687084 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0399296 0.0 0.213579 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain