Gene : Phvul.010G138400 P. vulgaris v2.1
Genomic Order:  1393 Name:  ? Phvul.010G138400
Secondary Identifier:  ? PAC:37143665
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G138400 0.5kb upstream 0.5kb upstream 3198 true Chr10: 42071127-42074324 Phaseolus vulgaris
Phvul.010G138400 0.5kb upstream 0.5kb upstream 500 false Chr10: 42071127-42071626 Phaseolus vulgaris
Phvul.010G138400 0.5kb downstream 0.5kb downstream 3198 true Chr10: 42071627-42074824 Phaseolus vulgaris
Phvul.010G138400 0.5kb downstream 0.5kb downstream 500 false Chr10: 42074325-42074824 Phaseolus vulgaris
Phvul.010G138400 1.0kb upstream 1.0kb upstream 3698 true Chr10: 42070627-42074324 Phaseolus vulgaris
Phvul.010G138400 1.0kb upstream 1.0kb upstream 1000 false Chr10: 42070627-42071626 Phaseolus vulgaris
Phvul.010G138400 1.0kb downstream 1.0kb downstream 3698 true Chr10: 42071627-42075324 Phaseolus vulgaris
Phvul.010G138400 1.0kb downstream 1.0kb downstream 1000 false Chr10: 42074325-42075324 Phaseolus vulgaris
Phvul.010G138400 2.0kb upstream 2.0kb upstream 4698 true Chr10: 42069627-42074324 Phaseolus vulgaris
Phvul.010G138400 2.0kb upstream 2.0kb upstream 2000 false Chr10: 42069627-42071626 Phaseolus vulgaris
Phvul.010G138400 2.0kb downstream 2.0kb downstream 4698 true Chr10: 42071627-42076324 Phaseolus vulgaris
Phvul.010G138400 2.0kb downstream 2.0kb downstream 2000 false Chr10: 42074325-42076324 Phaseolus vulgaris
Phvul.010G138400 5.0kb upstream 5.0kb upstream 7698 true Chr10: 42066627-42074324 Phaseolus vulgaris
Phvul.010G138400 5.0kb upstream 5.0kb upstream 5000 false Chr10: 42066627-42071626 Phaseolus vulgaris
Phvul.010G138400 5.0kb downstream 5.0kb downstream 7698 true Chr10: 42071627-42079324 Phaseolus vulgaris
Phvul.010G138400 5.0kb downstream 5.0kb downstream 5000 false Chr10: 42074325-42079324 Phaseolus vulgaris
Phvul.010G138400 10.0kb upstream 10.0kb upstream 12698 true Chr10: 42061627-42074324 Phaseolus vulgaris
Phvul.010G138400 10.0kb upstream 10.0kb upstream 10000 false Chr10: 42061627-42071626 Phaseolus vulgaris
Phvul.010G138400 10.0kb downstream 10.0kb downstream 12698 true Chr10: 42071627-42084324 Phaseolus vulgaris
Phvul.010G138400 10.0kb downstream 10.0kb downstream 10000 false Chr10: 42074325-42084324 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313146 5265 Fabidae View MSA
124073932 5270 Rosid View MSA
123737635 5271 Pentapetalae View MSA
122795020 5272 Eudicot View MSA
122049257 5273 Angiosperm View MSA
121349503 5274 Embryophyte View MSA
123381335 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.0779 0.0 49.0323   High
cufflinks 11.594 0.0 48.6185   High
cufflinks 7.94219 0.0 39.7647    
cufflinks 11.5039 0.0 37.126   High
cufflinks 9.2396 0.0 40.4836    
cufflinks 7.25786 0.0 33.4164   Low
cufflinks 8.75587 0.0 29.7943    
cufflinks 7.89753 0.0 27.5707   Low
cufflinks 8.84855 0.0 38.9548    
cufflinks 9.54462 0.0 41.2051    
cufflinks 10.2369 0.0 44.3306    

0 Strain