Gene : Phvul.010G124700 P. vulgaris v2.1

Defline:  (1 of 2) PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Genomic Order:  1252
Name:  ? Phvul.010G124700 Secondary Identifier:  ? PAC:37142758

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G124700 0.5kb upstream 0.5kb upstream 3596 true Chr10: 40575685-40579280 Phaseolus vulgaris
Phvul.010G124700 0.5kb upstream 0.5kb upstream 500 false Chr10: 40575685-40576184 Phaseolus vulgaris
Phvul.010G124700 0.5kb downstream 0.5kb downstream 3596 true Chr10: 40576185-40579780 Phaseolus vulgaris
Phvul.010G124700 0.5kb downstream 0.5kb downstream 500 false Chr10: 40579281-40579780 Phaseolus vulgaris
Phvul.010G124700 1.0kb upstream 1.0kb upstream 4096 true Chr10: 40575185-40579280 Phaseolus vulgaris
Phvul.010G124700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40575185-40576184 Phaseolus vulgaris
Phvul.010G124700 1.0kb downstream 1.0kb downstream 4096 true Chr10: 40576185-40580280 Phaseolus vulgaris
Phvul.010G124700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40579281-40580280 Phaseolus vulgaris
Phvul.010G124700 2.0kb upstream 2.0kb upstream 5096 true Chr10: 40574185-40579280 Phaseolus vulgaris
Phvul.010G124700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40574185-40576184 Phaseolus vulgaris
Phvul.010G124700 2.0kb downstream 2.0kb downstream 5096 true Chr10: 40576185-40581280 Phaseolus vulgaris
Phvul.010G124700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40579281-40581280 Phaseolus vulgaris
Phvul.010G124700 5.0kb upstream 5.0kb upstream 8096 true Chr10: 40571185-40579280 Phaseolus vulgaris
Phvul.010G124700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40571185-40576184 Phaseolus vulgaris
Phvul.010G124700 5.0kb downstream 5.0kb downstream 8096 true Chr10: 40576185-40584280 Phaseolus vulgaris
Phvul.010G124700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40579281-40584280 Phaseolus vulgaris
Phvul.010G124700 10.0kb upstream 10.0kb upstream 13096 true Chr10: 40566185-40579280 Phaseolus vulgaris
Phvul.010G124700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40566185-40576184 Phaseolus vulgaris
Phvul.010G124700 10.0kb downstream 10.0kb downstream 13096 true Chr10: 40576185-40589280 Phaseolus vulgaris
Phvul.010G124700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40579281-40589280 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314381 5265 Fabidae View MSA
124061626 5270 Rosid View MSA
123751106 5271 Pentapetalae View MSA
122797584 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 232.544 0.0 760.96 High High
cufflinks 101.319 0.0 290.185 High  
cufflinks 92.6306 0.0 262.097 High  
cufflinks 112.514 0.0 324.968 High  
cufflinks 120.312 0.0 351.217 High  
cufflinks 64.353 0.0 175.48 High Low
cufflinks 143.188 0.0 431.695 High  
cufflinks 113.632 0.0 329.923 High  
cufflinks 140.634 0.0 422.715 High  
cufflinks 127.273 0.0 375.703 High  
cufflinks 132.115 0.0 391.617 High  

0 Strain