Gene : Phvul.010G127300 P. vulgaris v2.1
Defline:  (1 of 3) K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) Genomic Order:  1278
Name:  ? Phvul.010G127300 Secondary Identifier:  ? PAC:37142702
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G127300 0.5kb upstream 0.5kb upstream 7773 true Chr10: 40800656-40808428 Phaseolus vulgaris
Phvul.010G127300 0.5kb upstream 0.5kb upstream 500 false Chr10: 40807929-40808428 Phaseolus vulgaris
Phvul.010G127300 0.5kb downstream 0.5kb downstream 7773 true Chr10: 40800156-40807928 Phaseolus vulgaris
Phvul.010G127300 0.5kb downstream 0.5kb downstream 500 false Chr10: 40800156-40800655 Phaseolus vulgaris
Phvul.010G127300 1.0kb upstream 1.0kb upstream 8273 true Chr10: 40800656-40808928 Phaseolus vulgaris
Phvul.010G127300 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40807929-40808928 Phaseolus vulgaris
Phvul.010G127300 1.0kb downstream 1.0kb downstream 8273 true Chr10: 40799656-40807928 Phaseolus vulgaris
Phvul.010G127300 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40799656-40800655 Phaseolus vulgaris
Phvul.010G127300 2.0kb upstream 2.0kb upstream 9273 true Chr10: 40800656-40809928 Phaseolus vulgaris
Phvul.010G127300 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40807929-40809928 Phaseolus vulgaris
Phvul.010G127300 2.0kb downstream 2.0kb downstream 9273 true Chr10: 40798656-40807928 Phaseolus vulgaris
Phvul.010G127300 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40798656-40800655 Phaseolus vulgaris
Phvul.010G127300 5.0kb upstream 5.0kb upstream 12273 true Chr10: 40800656-40812928 Phaseolus vulgaris
Phvul.010G127300 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40807929-40812928 Phaseolus vulgaris
Phvul.010G127300 5.0kb downstream 5.0kb downstream 12273 true Chr10: 40795656-40807928 Phaseolus vulgaris
Phvul.010G127300 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40795656-40800655 Phaseolus vulgaris
Phvul.010G127300 10.0kb upstream 10.0kb upstream 17273 true Chr10: 40800656-40817928 Phaseolus vulgaris
Phvul.010G127300 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40807929-40817928 Phaseolus vulgaris
Phvul.010G127300 10.0kb downstream 10.0kb downstream 17273 true Chr10: 40790656-40807928 Phaseolus vulgaris
Phvul.010G127300 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40790656-40800655 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305402 5265 Fabidae View MSA
124064143 5270 Rosid View MSA
123750884 5271 Pentapetalae View MSA
122797321 5272 Eudicot View MSA
122051122 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349008 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.1241 0.0 110.085 High  
cufflinks 81.1079 0.0 222.719 High High
cufflinks 32.4658 0.0 84.1404   Low
cufflinks 60.8749 0.0 162.621 High  
cufflinks 61.5394 0.0 164.624 High  
cufflinks 42.5718 0.0 111.316 High  
cufflinks 41.054 0.0 107.25 High  
cufflinks 34.8686 0.0 90.5944 High Low
cufflinks 52.2 0.0 138.171 High  
cufflinks 109.37 0.0 309.793 High High
cufflinks 65.3028 0.0 175.457 High  

0 Strain