Gene : Phvul.010G128700 P. vulgaris v2.1
Defline:  (1 of 1) PTHR34788:SF1 - F15I1.22 Genomic Order:  1292
Name:  ? Phvul.010G128700 Secondary Identifier:  ? PAC:37143201
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.010G128700 0.5kb upstream 0.5kb upstream 1258 true Chr10: 40945908-40947165 Phaseolus vulgaris
Phvul.010G128700 0.5kb upstream 0.5kb upstream 500 false Chr10: 40945908-40946407 Phaseolus vulgaris
Phvul.010G128700 0.5kb downstream 0.5kb downstream 1258 true Chr10: 40946408-40947665 Phaseolus vulgaris
Phvul.010G128700 0.5kb downstream 0.5kb downstream 500 false Chr10: 40947166-40947665 Phaseolus vulgaris
Phvul.010G128700 1.0kb upstream 1.0kb upstream 1758 true Chr10: 40945408-40947165 Phaseolus vulgaris
Phvul.010G128700 1.0kb upstream 1.0kb upstream 1000 false Chr10: 40945408-40946407 Phaseolus vulgaris
Phvul.010G128700 1.0kb downstream 1.0kb downstream 1758 true Chr10: 40946408-40948165 Phaseolus vulgaris
Phvul.010G128700 1.0kb downstream 1.0kb downstream 1000 false Chr10: 40947166-40948165 Phaseolus vulgaris
Phvul.010G128700 2.0kb upstream 2.0kb upstream 2758 true Chr10: 40944408-40947165 Phaseolus vulgaris
Phvul.010G128700 2.0kb upstream 2.0kb upstream 2000 false Chr10: 40944408-40946407 Phaseolus vulgaris
Phvul.010G128700 2.0kb downstream 2.0kb downstream 2758 true Chr10: 40946408-40949165 Phaseolus vulgaris
Phvul.010G128700 2.0kb downstream 2.0kb downstream 2000 false Chr10: 40947166-40949165 Phaseolus vulgaris
Phvul.010G128700 5.0kb upstream 5.0kb upstream 5758 true Chr10: 40941408-40947165 Phaseolus vulgaris
Phvul.010G128700 5.0kb upstream 5.0kb upstream 5000 false Chr10: 40941408-40946407 Phaseolus vulgaris
Phvul.010G128700 5.0kb downstream 5.0kb downstream 5758 true Chr10: 40946408-40952165 Phaseolus vulgaris
Phvul.010G128700 5.0kb downstream 5.0kb downstream 5000 false Chr10: 40947166-40952165 Phaseolus vulgaris
Phvul.010G128700 10.0kb upstream 10.0kb upstream 10758 true Chr10: 40936408-40947165 Phaseolus vulgaris
Phvul.010G128700 10.0kb upstream 10.0kb upstream 10000 false Chr10: 40936408-40946407 Phaseolus vulgaris
Phvul.010G128700 10.0kb downstream 10.0kb downstream 10758 true Chr10: 40946408-40957165 Phaseolus vulgaris
Phvul.010G128700 10.0kb downstream 10.0kb downstream 10000 false Chr10: 40947166-40957165 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026756 5273 Angiosperm View MSA
122306084 5265 Fabidae View MSA
124060408 5270 Rosid View MSA
123748070 5271 Pentapetalae View MSA
122790898 5272 Eudicot View MSA
121296533 5274 Embryophyte View MSA
123334681 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6013 0.0 5.90625    
cufflinks 0.124305 0.0 0.576252 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.93709 0.0 7.03258    
cufflinks 0.198614 0.0 0.869903 Low  
cufflinks 0.0861927 0.0 0.415579 Low Low
cufflinks 25.1707 0.0 69.4765   High
cufflinks 6.83323 0.0 21.7615    
cufflinks 39.1532 0.0 104.56 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.251728 0.0 1.08337 Low  

0 Strain