Gene : Phvul.006G069200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF14 - PROTEIN PMR5-RELATED Genomic Order:  676
Name:  ? Phvul.006G069200 Secondary Identifier:  ? PAC:37173574
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G069200 0.5kb upstream 0.5kb upstream 5245 true Chr06: 18108363-18113607 Phaseolus vulgaris
Phvul.006G069200 0.5kb upstream 0.5kb upstream 500 false Chr06: 18108363-18108862 Phaseolus vulgaris
Phvul.006G069200 0.5kb downstream 0.5kb downstream 5245 true Chr06: 18108863-18114107 Phaseolus vulgaris
Phvul.006G069200 0.5kb downstream 0.5kb downstream 500 false Chr06: 18113608-18114107 Phaseolus vulgaris
Phvul.006G069200 1.0kb upstream 1.0kb upstream 5745 true Chr06: 18107863-18113607 Phaseolus vulgaris
Phvul.006G069200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18107863-18108862 Phaseolus vulgaris
Phvul.006G069200 1.0kb downstream 1.0kb downstream 5745 true Chr06: 18108863-18114607 Phaseolus vulgaris
Phvul.006G069200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18113608-18114607 Phaseolus vulgaris
Phvul.006G069200 2.0kb upstream 2.0kb upstream 6745 true Chr06: 18106863-18113607 Phaseolus vulgaris
Phvul.006G069200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18106863-18108862 Phaseolus vulgaris
Phvul.006G069200 2.0kb downstream 2.0kb downstream 6745 true Chr06: 18108863-18115607 Phaseolus vulgaris
Phvul.006G069200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18113608-18115607 Phaseolus vulgaris
Phvul.006G069200 5.0kb upstream 5.0kb upstream 9745 true Chr06: 18103863-18113607 Phaseolus vulgaris
Phvul.006G069200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18103863-18108862 Phaseolus vulgaris
Phvul.006G069200 5.0kb downstream 5.0kb downstream 9745 true Chr06: 18108863-18118607 Phaseolus vulgaris
Phvul.006G069200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18113608-18118607 Phaseolus vulgaris
Phvul.006G069200 10.0kb upstream 10.0kb upstream 14745 true Chr06: 18098863-18113607 Phaseolus vulgaris
Phvul.006G069200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18098863-18108862 Phaseolus vulgaris
Phvul.006G069200 10.0kb downstream 10.0kb downstream 14745 true Chr06: 18108863-18123607 Phaseolus vulgaris
Phvul.006G069200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18113608-18123607 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308287 5265 Fabidae View MSA
124066732 5270 Rosid View MSA
123736595 5271 Pentapetalae View MSA
122792961 5272 Eudicot View MSA
122042931 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121310047 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9537 0.0 56.8499    
cufflinks 25.5045 0.0 65.9386   High
cufflinks 4.15488 0.0 12.1778   Low
cufflinks 36.8632 0.0 95.6 High High
cufflinks 13.014 0.0 34.6014    
cufflinks 8.35864 0.0 22.9324    
cufflinks 10.1983 0.0 27.4975    
cufflinks 13.8635 0.0 36.5369    
cufflinks 8.67994 0.0 23.7364    
cufflinks 3.55264 0.0 10.6699   Low
cufflinks 16.01 0.0 42.0216    

0 Strain