Gene : Phvul.009G089100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR12378:SF12 - EXPRESSED PROTEIN Genomic Order:  914
Name:  ? Phvul.009G089100 Secondary Identifier:  ? PAC:37148626
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.009G089100 0.5kb upstream 0.5kb upstream 2562 true Chr09: 14337726-14340287 Phaseolus vulgaris
Phvul.009G089100 0.5kb upstream 0.5kb upstream 500 false Chr09: 14337726-14338225 Phaseolus vulgaris
Phvul.009G089100 0.5kb downstream 0.5kb downstream 2562 true Chr09: 14338226-14340787 Phaseolus vulgaris
Phvul.009G089100 0.5kb downstream 0.5kb downstream 500 false Chr09: 14340288-14340787 Phaseolus vulgaris
Phvul.009G089100 1.0kb upstream 1.0kb upstream 3062 true Chr09: 14337226-14340287 Phaseolus vulgaris
Phvul.009G089100 1.0kb upstream 1.0kb upstream 1000 false Chr09: 14337226-14338225 Phaseolus vulgaris
Phvul.009G089100 1.0kb downstream 1.0kb downstream 3062 true Chr09: 14338226-14341287 Phaseolus vulgaris
Phvul.009G089100 1.0kb downstream 1.0kb downstream 1000 false Chr09: 14340288-14341287 Phaseolus vulgaris
Phvul.009G089100 2.0kb upstream 2.0kb upstream 4062 true Chr09: 14336226-14340287 Phaseolus vulgaris
Phvul.009G089100 2.0kb upstream 2.0kb upstream 2000 false Chr09: 14336226-14338225 Phaseolus vulgaris
Phvul.009G089100 2.0kb downstream 2.0kb downstream 4062 true Chr09: 14338226-14342287 Phaseolus vulgaris
Phvul.009G089100 2.0kb downstream 2.0kb downstream 2000 false Chr09: 14340288-14342287 Phaseolus vulgaris
Phvul.009G089100 5.0kb upstream 5.0kb upstream 7062 true Chr09: 14333226-14340287 Phaseolus vulgaris
Phvul.009G089100 5.0kb upstream 5.0kb upstream 5000 false Chr09: 14333226-14338225 Phaseolus vulgaris
Phvul.009G089100 5.0kb downstream 5.0kb downstream 7062 true Chr09: 14338226-14345287 Phaseolus vulgaris
Phvul.009G089100 5.0kb downstream 5.0kb downstream 5000 false Chr09: 14340288-14345287 Phaseolus vulgaris
Phvul.009G089100 10.0kb upstream 10.0kb upstream 12062 true Chr09: 14328226-14340287 Phaseolus vulgaris
Phvul.009G089100 10.0kb upstream 10.0kb upstream 10000 false Chr09: 14328226-14338225 Phaseolus vulgaris
Phvul.009G089100 10.0kb downstream 10.0kb downstream 12062 true Chr09: 14338226-14350287 Phaseolus vulgaris
Phvul.009G089100 10.0kb downstream 10.0kb downstream 10000 false Chr09: 14340288-14350287 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311568 5265 Fabidae View MSA
124064389 5270 Rosid View MSA
123748371 5271 Pentapetalae View MSA
122790696 5272 Eudicot View MSA
122047997 5273 Angiosperm View MSA
123429049 5275 Viridiplantae View MSA
121350542 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1946 0.0 38.8423    
cufflinks 14.6707 0.0 40.0204    
cufflinks 18.6791 0.0 49.9668    
cufflinks 23.4383 0.0 61.5965    
cufflinks 26.9195 0.0 70.4559    
cufflinks 12.209 0.0 33.8578   Low
cufflinks 19.1998 0.0 51.0126    
cufflinks 21.762 0.0 57.4397    
cufflinks 20.7938 0.0 54.9981    
cufflinks 9.75793 0.0 27.6553   Low
cufflinks 37.1777 0.0 96.2189 High High

0 Strain