Gene : Phvul.006G199800 P. vulgaris v2.1
Defline:  (1 of 2) K04043 - molecular chaperone DnaK (dnaK) Genomic Order:  2012
Name:  ? Phvul.006G199800 Secondary Identifier:  ? PAC:37171320
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.006G199800 0.5kb upstream 0.5kb upstream 4155 true Chr06: 29669851-29674005 Phaseolus vulgaris
Phvul.006G199800 0.5kb upstream 0.5kb upstream 500 false Chr06: 29673506-29674005 Phaseolus vulgaris
Phvul.006G199800 0.5kb downstream 0.5kb downstream 4155 true Chr06: 29669351-29673505 Phaseolus vulgaris
Phvul.006G199800 0.5kb downstream 0.5kb downstream 500 false Chr06: 29669351-29669850 Phaseolus vulgaris
Phvul.006G199800 1.0kb upstream 1.0kb upstream 4655 true Chr06: 29669851-29674505 Phaseolus vulgaris
Phvul.006G199800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 29673506-29674505 Phaseolus vulgaris
Phvul.006G199800 1.0kb downstream 1.0kb downstream 4655 true Chr06: 29668851-29673505 Phaseolus vulgaris
Phvul.006G199800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 29668851-29669850 Phaseolus vulgaris
Phvul.006G199800 2.0kb upstream 2.0kb upstream 5655 true Chr06: 29669851-29675505 Phaseolus vulgaris
Phvul.006G199800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 29673506-29675505 Phaseolus vulgaris
Phvul.006G199800 2.0kb downstream 2.0kb downstream 5655 true Chr06: 29667851-29673505 Phaseolus vulgaris
Phvul.006G199800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 29667851-29669850 Phaseolus vulgaris
Phvul.006G199800 5.0kb upstream 5.0kb upstream 8655 true Chr06: 29669851-29678505 Phaseolus vulgaris
Phvul.006G199800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 29673506-29678505 Phaseolus vulgaris
Phvul.006G199800 5.0kb downstream 5.0kb downstream 8655 true Chr06: 29664851-29673505 Phaseolus vulgaris
Phvul.006G199800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 29664851-29669850 Phaseolus vulgaris
Phvul.006G199800 10.0kb upstream 10.0kb upstream 13655 true Chr06: 29669851-29683505 Phaseolus vulgaris
Phvul.006G199800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 29673506-29683505 Phaseolus vulgaris
Phvul.006G199800 10.0kb downstream 10.0kb downstream 13655 true Chr06: 29659851-29673505 Phaseolus vulgaris
Phvul.006G199800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 29659851-29669850 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302783 5265 Fabidae View MSA
124061480 5270 Rosid View MSA
123740166 5271 Pentapetalae View MSA
122790354 5272 Eudicot View MSA
122041628 5273 Angiosperm View MSA
121345061 5274 Embryophyte View MSA
123427944 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.2821 0.0 91.2059 High  
cufflinks 51.8262 0.0 142.694 High High
cufflinks 17.2015 0.0 44.4788   Low
cufflinks 48.4169 0.0 131.791 High High
cufflinks 28.2012 0.0 73.7632    
cufflinks 18.7005 0.0 48.3981   Low
cufflinks 32.0238 0.0 84.7581 High  
cufflinks 38.6718 0.0 103.923 High  
cufflinks 37.4713 0.0 100.267 High  
cufflinks 31.598 0.0 83.4055    
cufflinks 31.4463 0.0 82.8663    

0 Strain